Evidence map›Paper›PMID 20658475›Full record

ArticleHematological oncology2011

Variation in innate immunity genes and risk of multiple myeloma.

Mark P Purdue, Qing Lan, Idan Menashe, Tongzhang Zheng, Yawei Zhang, Meredith Yeager, H Dean Hosgood, Shelia H Zahm, Stephen J Chanock, Nathaniel Rothman and 1 more

Abstract read
In one paragraph

Article in Hematological oncology, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers, 3 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed, 3 pooled it
1.2field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 3 syntheses or guidelines pooled it, 26 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Pooled it
  4. Gender disparities in the tumor genetics and clinical outcome of multiple myeloma.Cancer epidemiology, biomarkers & prevention : a publication of the American Association for Cancer Research, cosponsored by the American Society of Preventive Oncology · 2011
    Trial
  5. Article
  6. Article
  7. Review
  8. Article
  9. Review
  10. Article
  11. Review
  12. Review
  13. Lymphoid malignancies in U.S. Asians: incidence rate differences by birthplace and acculturation.Cancer epidemiology, biomarkers & prevention : a publication of the American Association for Cancer Research, cosponsored by the American Society of Preventive Oncology · 2011
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 1 country.

Mark P PurdueDivision of Cancer Epidemiology and Genetics, National Cancer Institute, NIH/DHHS, Bethesda, MD, USA. purduem@mail.nih.gov
Qing Lan
Idan Menashe
Tongzhang Zheng
Yawei Zhang
Meredith Yeager
H Dean Hosgood
Shelia H Zahm
Stephen J Chanock
Nathaniel Rothman
Dalsu Baris
National Cancer Institute · USUnited States Department of Health and Human Services · USDivision of Cancer Epidemiology and GeneticsYale University · US

Funding

Occupational and Environmental Determinants of Cancer among Women and MinoritiesZIACP010123 · NCI · DIVISION OF CANCER EPIDEMIOLOGY AND GENETICS · PI HOFMANN, JONATHAN · 2009 to 2025
$8.3M
Intramural NIH HHS Z99 CA999999NCI NIH HHS N01 CO012400NCI NIH HHS N01-CO-12400
6 · The paper itself

Abstract

Multiple myeloma (MM) is a B-cell lymphoid malignancy suspected to be associated with immunologic factors. Given recent findings associating single-nucleotide polymorphisms (SNPs) in innate immunity genes with non-Hodgkin lymphoma, we conducted an investigation of innate immune gene variants using specimens from a population-based case-control study of MM conducted in Connecticut women. Tag SNPs (N = 1461) summarizing common variation in 149 gene regions were genotyped in non-Hispanic Caucasian subjects (103 cases, 475 controls). Odds ratios (OR) and 95% confidence intervals (CI) relating SNP associations with MM were computed using unconditional logistic regression, while the MinP test was used to investigate associations with MM at the gene level. We calculated permutation-adjusted P-values and false discovery rates (FDR) to account for the number of comparisons performed in SNP-level and gene-level tests, respectively. Three genes were associated with MM when controlling for a FDR of ≤10%: SERPINE1 (P(MinP)  < 0.0001; FDR = 0.02), CCR7 (P(MinP)  = 0.0006; FDR = 0.06) and HGF (P(MinP)  = 0.001; FDR = 0.08). Two SNPs demonstrated robust associations: SERPINE1 rs2227667 (P = 2.1 × 10(-5) , P(permutation)  = 0.03) and HGF rs17501108 (P = 5.0 × 10(-5) , P(permutation)  = 0.07). Our findings suggest that genetic variants in SERPINE1 and HGF, and possibly CCR7, are associated with MM risk, and warrant further investigation in other studies.

Indexed as

Polymorphism, Single NucleotideAdultAgedAged, 80 and overFemaleHepatocyte Growth FactorHumansImmunity, InnateMiddle AgedMultiple MyelomaPlasminogen Activator Inhibitor 1Receptors, CCR7Risk FactorsCCR7 protein, humanHepatocyte Growth FactorPlasminogen Activator Inhibitor 1Receptors, CCR7SERPINE1 protein, human

Identifiers

PMID20658475
PMCPMC2980579
OpenAlexW2106957792

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.