Evidence map›Paper›PMID 20656873›Full record

ArticleApplied and environmental microbiology2010

A population genetics-based and phylogenetic approach to understanding the evolution of virulence in the genus Listeria.

Henk C den Bakker, Brittany N Bundrant, Esther D Fortes, Renato H Orsi, Martin Wiedmann

Abstract read
In one paragraph

Article in Applied and environmental microbiology, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed.

  1. Human Listeriosis.Clinical microbiology reviews · 2023
    Review
  2. Article
  3. Whole-genome sequencing ofFrontiers in microbiology · 2023
    Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Atypical HemolyticInfection and immunity · 2019
    Article
  10. Article
  11. Genetic Separation ofFrontiers in cellular and infection microbiology · 2018
    Article
  12. Genetic Stability and Evolution of theApplied and environmental microbiology · 2017
    Article
  13. Article
  14. Review
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Henk C den BakkerDepartment of Food Science, Cornell University, Ithaca, New York 14853, USA. hcd5@cornell.edu
Brittany N Bundrant
Esther D Fortes
Renato H Orsi
Martin Wiedmann

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The genus Listeria includes (i) the opportunistic pathogens L. monocytogenes and L. ivanovii, (ii) the saprotrophs L. innocua, L. marthii, and L. welshimeri, and (iii) L. seeligeri, an apparent saprotroph that nevertheless typically contains the prfA virulence gene cluster. A novel 10-loci multilocus sequence typing scheme was developed and used to characterize 67 isolates representing six Listeria spp. (excluding L. grayi) in order to (i) provide an improved understanding of the phylogeny and evolution of the genus Listeria and (ii) use Listeria as a model to study the evolution of pathogenicity in opportunistic environmental pathogens. Phylogenetic analyses identified six well-supported Listeria species that group into two main subdivisions, with each subdivision containing strains with and without the prfA virulence gene cluster. Stochastic character mapping and phylogenetic analysis of hly, a gene in the prfA cluster, suggest that the common ancestor of the genus Listeria contained the prfA virulence gene cluster and that this cluster was lost at least five times during the evolution of Listeria, yielding multiple distinct saprotrophic clades. L. welshimeri, which appears to represent the most ancient clade that arose from an ancestor with a prfA cluster deletion, shows a considerably lower average sequence divergence than other Listeria species, suggesting a population bottleneck and a putatively different ecology than other saprotrophic Listeria species. Overall, our data suggest that, for some pathogens, loss of virulence genes may represent a selective advantage, possibly by facilitating adaptation to a specific ecological niche.

Indexed as

Biological EvolutionGenetics, PopulationPhylogenyBacterial ProteinsBacterial ToxinsBase SequenceBayes TheoremDNA PrimersHeat-Shock ProteinsHemolysin ProteinsLikelihood FunctionsListeriaModels, GeneticMolecular Sequence DataMultigene FamilyPeptide Termination FactorsBacterial ProteinsBacterial ToxinsDNA PrimersHeat-Shock ProteinsHemolysin ProteinshlyA protein, Listeria monocytogenesPeptide Termination FactorsPrfA protein, Listeria monocytogenes

Identifiers

PMID20656873
PMCPMC2937515

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.