Evidence map›Paper›PMID 20655841›Full record

ArticleBiophysical journal2010

Blockage of anthrax PA63 pore by a multicharged high-affinity toxin inhibitor.

Ekaterina M Nestorovich, Vladimir A Karginov, Alexander M Berezhkovskii, Sergey M Bezrukov

Abstract read
In one paragraph

Article in Biophysical journal, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 34 papers.

0numbers the graph read from it
0cells of the map it votes in
34citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

34 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Site-Specific Labeling andBiochemistry · 2021
    Article
  6. Article
  7. Article
  8. Article
  9. Review
  10. Article
  11. Reply to Yamini and Nestorovich: Alternate clamped states of the anthrax toxin protective antigen channel.Proceedings of the National Academy of Sciences of the United States of America · 2017
    Article
  12. Relevance of the alternate conductance states of anthrax toxin channel.Proceedings of the National Academy of Sciences of the United States of America · 2017
    Article
  13. Article
  14. Article
  15. Article
  16. Review
  17. Review
  18. Article
  19. Article
  20. Designing inhibitors of anthrax toxin.Expert opinion on drug discovery · 2014
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Ekaterina M NestorovichLaboratory of Physical and Structural Biology, Program in Physical Biology, Eunice Kennedy Shriver National Institute of Child Health and Human Development, Bethesda, Maryland, USA. nestoroe@mail.nih.gov
Vladimir A Karginov
Alexander M Berezhkovskii
Sergey M Bezrukov

Funding

Biophysics of Large Membrane ChannelsZIAHD000072 · NICHD · EUNICE KENNEDY SHRIVER NATIONAL INSTITUTE OF CHILD HEALTH & HUMAN DEVELOPMENT · PI BEZRUKOV, SERGEY M · 2009 to 2025
$22.8M
Intramural NIH HHS
6 · The paper itself

Abstract

Single channels of Bacillus anthracis protective antigen, PA(63), were reconstituted into planar lipid membranes and their inhibition by cationic aminopropylthio-beta-cyclodextrin, AmPrbetaCD, was studied. The design of the highly efficient inhibitor, the sevenfold symmetrical cyclodextrin molecule chemically modified to add seven positive charges, was guided by the symmetry and predominantly negative charge of the PA(63) pore. The protective action of this compound has been demonstrated earlier at both single-molecule and whole-organism levels. In this study, using noise analysis, statistics of time-resolved single-channel closure events, and multichannel measurements, we find that AmPrbetaCD action is bimodal. The inhibitor, when added to the cis side of the membrane, blocks the channel reversibly. At high salt concentrations, the AmPrbetaCD blockage of the channel is well described as a two-state Markov process, in which both the on- and off-rates are functions of the salt concentration, whereas the applied voltage affects only the off-rate. At salt concentrations smaller than 1.5 M, the second mode of AmPrbetaCD action on the channel is discovered: addition of the inhibitor enhances voltage gating, making the closed states of the channel more favorable. The effect depends on the lipid composition of the membrane.

Indexed as

Antigens, BacterialBacterial Toxinsbeta-CyclodextrinsCell MembraneDose-Response Relationship, DrugElectric ConductivityIon Channel GatingKineticsLipid MetabolismMarkov ChainsModels, MolecularPorosityProtein BindingProtein Conformationanthrax toxinAntigens, BacterialBacterial Toxinsbeta-Cyclodextrinsper-6-(3-aminopropylthio)-beta-cyclodextrin

Identifiers

PMID20655841
PMCPMC2895364

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.