Evidence map›Paper›PMID 20650894›Full record

ArticleThe Journal of biological chemistry2010

Comprehensive spectroscopic, steady state, and transient kinetic studies of a representative siderophore-associated flavin monooxygenase.

Jeffery A Mayfield, Rosanne E Frederick, Bennett R Streit, Timothy A Wencewicz, David P Ballou, Jennifer L DuBois

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
4.2field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 48 citations in OpenAlex.

  1. Article
  2. Unlocking the catalytic precision of ligand-controlled enzymatic halogenation.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  3. Article
  4. Review
  5. Review
  6. Article
  7. PvdF of pyoverdin biosynthesis is a structurally unique NArchives of biochemistry and biophysics · 2019
    Article
  8. Flavin oxidation in flavin-dependent N-monooxygenases.Protein science : a publication of the Protein Society · 2019
    Article
  9. Article
  10. Article
  11. Review
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Auxin biosynthesis.The arabidopsis book · 2014
    Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Jeffery A MayfieldDepartment of Chemistry and Biochemistry, University of Notre Dame, Notre Dame, Indiana 46556, USA.
Rosanne E Frederick
Bennett R Streit
Timothy A Wencewicz
David P Ballou
Jennifer L DuBois
University of Notre Dame · USUniversity of Michigan–Ann Arbor · US

Funding

Chemistry-Biochemistry-Biology Training Program at Notre DameT32GM075762 · NIGMS · UNIVERSITY OF NOTRE DAME · PI CHANG, MAYLAND F, MOBASHERY, SHAHRIAR · 2007 to 2021
$3.7M
Understanding the diverse biochemistry of the chlorite dismutase family: from O2 to hemeR01GM090260 · NIGMS · UNIVERSITY OF NOTRE DAME · PI DUBOIS, JENNIFER L · 2009 to 2018
$2.7M
RAPID KINETICS STUDY OF BIOLOGICAL OXYGENASESR01GM020877 · NIGMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI BALLOU, DAVID P · 1985 to 2009
$2.2M
RAPID KINETIC &OTHER STUDIES OF BIOLOGICAL OXYGENASESR37GM020877 · NIGMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI BALLOU, DAVID P · 1992 to 2002
$637k
MECHANISMS OF MEMBRANE FUSIONF32GM020877 · NIGMS · JOHNS HOPKINS UNIVERSITY · PI HODGES, ALEX R · 2001 to 2003
$91k
NIGMS NIH HHS F32 GM020877NIGMS NIH HHS GM20877NIGMS NIH HHS R01 GM020877NIGMS NIH HHS R01 GM090260NIGMS NIH HHS R37 GM020877NIGMS NIH HHS T32 GM075762NIGMS NIH HHS T32GM075762
6 · The paper itself

Abstract

Many siderophores used for the uptake and intracellular storage of essential iron contain hydroxamate chelating groups. Their biosyntheses are typically initiated by hydroxylation of the primary amine side chains of l-ornithine or l-lysine. This reaction is catalyzed by members of a widespread family of FAD-dependent monooxygenases. Here the kinetic mechanism for a representative family member has been extensively characterized by steady state and transient kinetic methods, using heterologously expressed N(5)-l-ornithine monooxygenase from the pathogenic fungus Aspergillus fumigatus. Spectroscopic data and kinetic analyses suggest a model in which a molecule of hydroxylatable substrate serves as an activator for the reaction of the reduced flavin and O(2). The rate acceleration is only ∼5-fold, a mild effect of substrate on formation of the C4a-hydroperoxide that does not influence the overall rate of turnover. The effect is also observed with the bacterial ornithine monooxygenase PvdA. The C4a-hydroperoxide is stabilized in the absence of hydroxylatable substrate by the presence of bound NADP(+) (t(½) = 33 min, 25 °C, pH 8). NADP(+) therefore is a likely regulator of O(2) and substrate reactivity in the siderophore-associated monooxygenases. Aside from the activating effect of the hydroxylatable substrate, the siderophore-associated monooxygenases share a kinetic mechanism with the hepatic microsomal flavin monooxygenases and bacterial Baeyer-Villiger monooxygenases, with which they share only moderate sequence homology and from which they are distinguished by their acute substrate specificity. The remarkable specificity of the N(5)-l-ornithine monooxygenase-catalyzed reaction suggests added means of reaction control beyond those documented in related well characterized flavoenzymes.

Indexed as

Models, ChemicalAspergillus fumigatusFlavinsFungal ProteinsKineticsMixed Function OxygenasesOxygenSiderophoresFlavinsFungal ProteinsMixed Function Oxygenasesornithine hydroxylase, Pseudomonas aeruginosaornithine N5-oxygenaseOxygenSiderophores

Identifiers

PMID20650894
PMCPMC2945530
OpenAlexW2003760792

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.