Evidence map›Paper›PMID 20649983›Full record

ArticleBMC genomics2010

Brain transcriptional stability upon prion protein-encoding gene invalidation in zygotic or adult mouse.

Sead Chadi, Rachel Young, Sandrine Le Guillou, Gaëlle Tilly, Frédérique Bitton, Marie-Laure Martin-Magniette, Ludivine Soubigou-Taconnat, Sandrine Balzergue, Marthe Vilotte, Coralie Peyre and 6 more

Open access · goldAbstract read
In one paragraph

Article in BMC genomics, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
1.1field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 20 citations in OpenAlex.

  1. The multiple functions of PrPJournal of molecular medicine (Berlin, Germany) · 2022
    Review
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  10. The prion protein family: a view from the placenta.Frontiers in cell and developmental biology · 2014
    Review
  11. To develop with or without the prion protein.Frontiers in cell and developmental biology · 2014
    Review
  12. Article
  13. Article
  14. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 5 institutions in 1 country.

Sead ChadiINRA, UMR1313, Génétique Animale et Biologie Intégrative, F-78350, Jouy-en-Josas, France.
Rachel Young
Sandrine Le Guillou
Gaëlle Tilly
Frédérique Bitton
Marie-Laure Martin-Magniette
Ludivine Soubigou-Taconnat
Sandrine Balzergue
Marthe Vilotte
Coralie Peyre
Bruno Passet
Vincent Béringue
Jean-Pierre Renou
Fabienne Le Provost
Hubert Laude
Jean-Luc Vilotte
Génétique Animale et Biologie Intégrative · FRCentre National de la Recherche Scientifique · FRVirologie et Immunologie Moléculaires · FRAgroParisTech · FRDépartement Génétique Animale · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThe physiological function of the prion protein remains largely elusive while its key role in prion infection has been expansively documented. To potentially assess this conundrum, we performed a comparative transcriptomic analysis of the brain of wild-type mice with that of transgenic mice invalidated at this locus either at the zygotic or at the adult stages.

resultsOnly subtle transcriptomic differences resulting from the Prnp knockout could be evidenced, beside Prnp itself, in the analyzed adult brains following microarray analysis of 24 109 mouse genes and QPCR assessment of some of the putatively marginally modulated loci. When performed at the adult stage, neuronal Prnp disruption appeared to sequentially induce a response to an oxidative stress and a remodeling of the nervous system. However, these events involved only a limited number of genes, expression levels of which were only slightly modified and not always confirmed by RT-qPCR. If not, the qPCR obtained data suggested even less pronounced differences.

conclusionsThese results suggest that the physiological function of PrP is redundant at the adult stage or important for only a small subset of the brain cell population under classical breeding conditions. Following its early reported embryonic developmental regulation, this lack of response could also imply that PrP has a more detrimental role during mouse embryogenesis and that potential transient compensatory mechanisms have to be searched for at the time this locus becomes transcriptionally activated.

Indexed as

Gene Expression ProfilingGene SilencingTranscription, GeneticAgingAnimalsBrainFemaleGene Knockout TechniquesGenetic LociMaleMiceNeuronsPrionsZygotePrions

Identifiers

PMID20649983
PMCPMC3091645
OpenAlexW2155345820

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.