Evidence map›Paper›PMID 20643970›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2010

Picosecond primary structural transition of the heme is retarded after nitric oxide binding to heme proteins.

Sergei G Kruglik, Byung-Kuk Yoo, Stefan Franzen, Marten H Vos, Jean-Louis Martin, Michel Negrerie

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
2.3field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 50 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Ultrafast dynamics of heme distortion in the OCommunications chemistry · 2021
    Article
  5. Article
  6. Article
  7. Implications of short time scale dynamics on long time processes.Structural dynamics (Melville, N.Y.) · 2017
    Review
  8. Article
  9. NO binding kinetics in myoglobin investigated by picosecond Fe K-edge absorption spectroscopy.Proceedings of the National Academy of Sciences of the United States of America · 2015
    Article
  10. Article
  11. Tryptophan-to-heme electron transfer in ferrous myoglobins.Proceedings of the National Academy of Sciences of the United States of America · 2015
    Article
  12. Motion of proximal histidine and structural allosteric transition in soluble guanylate cyclase.Proceedings of the National Academy of Sciences of the United States of America · 2015
    Article
  13. Article
  14. Article
  15. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 2 countries.

Sergei G KruglikLaboratoire d'Optique et Biosciences, Institut National de la Santé et de la Recherche Médicale, Ecole Polytechnique, 91128 Palaiseau, France. sergei.kruglik@upmc.fr
Byung-Kuk Yoo
Stefan Franzen
Marten H Vos
Jean-Louis Martin
Michel Negrerie
École Polytechnique · FRNorth Carolina State University · USSorbonne Université · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

We investigated the ultrafast structural transitions of the heme induced by nitric oxide (NO) binding for several heme proteins by subpicosecond time-resolved resonance Raman and femtosecond transient absorption spectroscopy. We probed the heme iron motion by the evolution of the iron-histidine Raman band intensity after NO photolysis. Unexpectedly, we found that the heme response and iron motion do not follow the kinetics of NO rebinding. Whereas NO dissociation induces quasi-instantaneous iron motion and heme doming (<0.6 ps), the reverse process results in a much slower picosecond movement of the iron toward the planar heme configuration after NO binding. The time constant for this primary domed-to-planar heme transition varies among proteins (approximately 30 ps for myoglobin and its H64V mutant, approximately 15 ps for hemoglobin, approximately 7 ps for dehaloperoxidase, and approximately 6 ps for cytochrome c) and depends upon constraints exerted by the protein structure on the heme cofactor. This observed phenomenon constitutes the primary structural transition in heme proteins induced by NO binding.

Indexed as

Allosteric RegulationHemeHemoglobinsHydrogen BondingKineticsMutationMyoglobinNitric OxideProtein BindingTime FactorsHemeHemoglobinsMyoglobinNitric Oxide

Identifiers

PMID20643970
PMCPMC2922218
OpenAlexW1995546801

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.