Evidence map›Paper›PMID 20643734›Full record

ArticlePhilosophical transactions of the Royal Society of London. Series B, Biological sciences2010

Divergence, demography and gene loss along the human lineage.

Hie Lim Kim, Takeshi Igawa, Ayaka Kawashima, Yoko Satta, Naoyuki Takahata

Abstract read
In one paragraph

Article in Philosophical transactions of the Royal Society of London. Series B, Biological sciences, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed.

  1. Article
  2. Article
  3. CHRFAM7A: a human-specific α7-nicotinic acetylcholine receptor gene shows differential responsiveness of human intestinal epithelial cells to LPS.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2015
    Article
  4. A human-specific allelic group of the MHC DRB1 gene in primates.Journal of physiological anthropology · 2014
    Article
  5. Article
  6. Great ape genomics.ILAR journal · 2013
    Review
  7. Article
  8. Review
  9. Review
  10. Genetics and the causes of evolution: 150 years of progress since Darwin.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2010
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Hie Lim KimHayama Center for Advanced Studies, Hayama, Kanagawa 240-0193, Japan.
Takeshi Igawa
Ayaka Kawashima
Yoko Satta
Naoyuki Takahata

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Genomic DNA sequences are an irreplaceable source for reconstructing the vanished past of living organisms. Based on updated sequence data, this paper summarizes our studies on species divergence time, ancient population size and functional loss of genes in the primate lineage leading to modern humans (Homo sapiens sapiens). The inter- and intraspecific comparisons of DNA sequences suggest that the human lineage experienced a rather severe bottleneck in the Middle Pleistocene, throughout which period the subdivided African population played a predominant role in shaping the genetic architecture of modern humans. Also, published and newly identified human-specific pseudogenes (HSPs) are enumerated in order to infer their significance for human evolution. Of the 121 candidate genes obtained, authentic HSPs turn out to comprise only 25 olfactory receptor genes, four T cell receptor genes and nine other genes. The fixation of HSPs has been too rare over the past 6-7 Myr to account for species differences between humans and chimpanzees.

Indexed as

Biological EvolutionEvolution, MolecularFounder EffectGenetics, PopulationPopulation DynamicsAnimalsHumansLikelihood FunctionsMarkov ChainsModels, GeneticMonte Carlo MethodPrimatesPseudogenesSequence Analysis, DNASpecies Specificity

Identifiers

PMID20643734
PMCPMC2935094

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.