Evidence map›Paper›PMID 20643655›Full record

ArticleThe Journal of biological chemistry2010

Deletions and mutations in the acidic lipid-binding region of the plasma membrane Ca2+ pump: a study on different splicing variants of isoform 2.

Marisa Brini, Francesca Di Leva, Claudia K Ortega, Teuta Domi, Denis Ottolini, Emanuela Leonardi, Silvio C E Tosatto, Ernesto Carafoli

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
0.7field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 24 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Plasma Membrane CaFrontiers in cellular neuroscience · 2021
    Article
  5. Review
  6. Primary Active CaCold Spring Harbor perspectives in biology · 2020
    Review
  7. Review
  8. Article
  9. Article
  10. Article
  11. Review
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Marisa BriniDepartment of Biological Chemistry, University of Padova, 35131 Padova, Italy. marisa.brini@unipd.it
Francesca Di Leva
Claudia K Ortega
Teuta Domi
Denis Ottolini
Emanuela Leonardi
Silvio C E Tosatto
Ernesto Carafoli
University of Padua · ITVeneto Institute of Molecular Medicine · IT

Funding

Telethon GGP04169
6 · The paper itself

Abstract

Acidic phospholipids increase the affinity of the plasma membrane Ca(2+)-ATPase pump for Ca(2+). They interact with the C-terminal region of the pump and with a domain in the loop connecting transmembrane domains 2 and 3 (A(L) region) next to site A of alternative splicing. The contribution of the two phospholipid-binding sites and the possible interference of splicing inserts at site A with the regulation of the ATPase activity of isoform 2 of the pump by phospholipids have been analyzed. The activity of the full-length z/b variant (no insert at site A), the w/b (with insert at site A), and the w/a variant, containing both the 45-amino acid A-site insert and a C-site insert that truncates the pump in the calmodulin binding domain, has been analyzed in microsomal membranes of overexpressing CHO cells. The A-site insertion did not modify the phospholipid sensitivity of the pump, but the doubly inserted w/a variant became insensitive to acidic phospholipids, even if containing the intact A(L) phospholipid binding domain. Pump mutants in which 12 amino acids had been deleted, or single lysine mutations introduced, in the A(L) region were studied by monitoring agonist-induced Ca(2+) transients in overexpressing CHO cells. The 12-residue deletion completely abolished the ATPase activity of the w/a variant but only reduced that of the z/b variant, which was also affected by the single lysine substitutions in the same domain. A structural interpretation of the interplay of the pump with phospholipids, and of the mechanism of their activation, is proposed on the basis of molecular modeling studies.

Indexed as

Alternative SplicingModels, MolecularAmino Acid SequenceAnimalsCalciumCHO CellsCricetinaeCricetulusHumansIsoenzymesMicrosomesMutation, MissensePhospholipidsPlasma Membrane Calcium-Transporting ATPasesProtein Structure, TertiaryRatsATP2B2 protein, humanCalciumIsoenzymesPhospholipidsPlasma Membrane Calcium-Transporting ATPases

Identifiers

PMID20643655
PMCPMC2945572
OpenAlexW1976515437

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.