Evidence map›Paper›PMID 20643095›Full record

ArticleBiochemical and biophysical research communications2010

High affinity, dsRNA binding by disconnected interacting protein 1.

Daniel J Catanese, Kathleen S Matthews

Abstract read
In one paragraph

Article in Biochemical and biophysical research communications, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.1field-weighted citation impact, top 46% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 3 citations in OpenAlex.

  1. Article
  2. Disconnected Interacting Protein 1 binds with high affinity to pre-tRNA and ADAT.Biochemical and biophysical research communications · 2011
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Daniel J CataneseDepartment of Biochemistry and Cell Biology, Rice University, 6100 Main St., Houston, TX 77005, United States. catanese@bcm.edu
Kathleen S Matthews
Rice University · US

Funding

TRAINING PROGRAM FOR MD/PHD STUDENTST32GM008208 · NIGMS · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI STEINMAN, RICHARD A · 1987 to 2021
$15.4M
PHYSICAL AND GENETIC STUDIES OF REPRESSOR PROTEINSR01GM022441 · NIGMS · RICE UNIVERSITY · PI MATTHEWS, KATHLEEN S · 1985 to 2009
$1.7M
NIGMS NIH HHS 5T 32-GM08208NIGMS NIH HHS GM22441NIGMS NIH HHS R01 GM022441NIGMS NIH HHS T32 GM008208
6 · The paper itself

Abstract

Disconnected interacting protein 1 (DIP1) appears from sequence analysis and preliminary binding studies to be a member of the dsRNA-binding protein family. Of interest, DIP1 was shown previously to interact with and influence multiple proteins involved in transcription regulation in Drosophila melanogaster. We show here that the longest isoform of this protein, DIP1-c, exhibits a 500-fold preference for dsRNA over dsDNA of similar nucleotide sequence. Further, DIP1-c demonstrated very high affinity for a subset of dsRNA ligands, with binding in the picomolar range for VA1 RNA and miR-iab-4 precursor stem-loop, a potential physiological RNA target involved in regulating expression of its protein partner, Ultrabithorax.

Indexed as

Base SequenceDrosophila ProteinsElectrophoretic Mobility Shift AssayMolecular Sequence DataNucleic Acid ConformationProtein BindingRNA, Double-StrandedRNA, ViralTranscription Factorsadenovirus associated RNADISCO Interacting Protein 1, DrosophilaDrosophila ProteinsRNA, Double-StrandedRNA, ViralTranscription Factors

Identifiers

PMID20643095
PMCPMC2931317
OpenAlexW2072418297

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.