Evidence map›Paper›PMID 20643084›Full record

ArticleBiophysical journal2010

Structure and orientation of a voltage-sensor toxin in lipid membranes.

Hyun Ho Jung, Hoi Jong Jung, Mirela Milescu, Chul Won Lee, Seungkyu Lee, Ju Yeon Lee, Young-Jae Eu, Ha Hyung Kim, Kenton J Swartz, Jae Il Kim

Open access · bronzeAbstract read
In one paragraph

Article in Biophysical journal, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
0.7field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 30 citations in OpenAlex.

  1. Review
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  13. Structural interactions of a voltage sensor toxin with lipid membranes.Proceedings of the National Academy of Sciences of the United States of America · 2014
    Article
  14. Review
  15. Inhibition of A-type potassium current by the peptide toxin SNX-482.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2014
    Article
  16. Opening the shaker K+ channel with hanatoxin.The Journal of general physiology · 2013
    Article
  17. Article
  18. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 2 countries.

Hyun Ho JungDepartment of Life Science, Gwangju Institute of Science and Technology, Gwangju, Korea.
Hoi Jong Jung
Mirela Milescu
Chul Won Lee
Seungkyu Lee
Ju Yeon Lee
Young-Jae Eu
Ha Hyung Kim
Kenton J Swartz
Jae Il Kim
Gwangju Institute of Science and Technology · KRNational Institutes of Health · USScripps Research Institute · US

Funding

Gating mechanisms and pharmacology of voltage-activated ion channelsZIANS002945 · NINDS · NATIONAL INSTITUTE OF NEUROLOGICAL DISORDERS AND STROKE · PI SWARTZ, KENTON · 2009 to 2025
$44.2M
Intramural NIH HHS ZIA NS002945
6 · The paper itself

Abstract

Amphipathic protein toxins from tarantula venom inhibit voltage-activated potassium (Kv) channels by binding to a critical helix-turn-helix motif termed the voltage sensor paddle. Although these toxins partition into membranes to bind the paddle motif, their structure and orientation within the membrane are unknown. We investigated the interaction of a tarantula toxin named SGTx with membranes using both fluorescence and NMR spectroscopy. Depth-dependent fluorescence-quenching experiments with brominated lipids suggest that Trp30 in SGTx is positioned approximately 9 A from the center of the bilayer. NMR spectra reveal that the inhibitor cystine knot structure of the toxin does not radically change upon membrane partitioning. Transferred cross-saturation NMR experiments indicate that the toxin's hydrophobic protrusion contacts the hydrophobic core of the membrane, whereas most surrounding polar residues remain at interfacial regions of the bilayer. The inferred orientation of the toxin reveals a twofold symmetry in the arrangement of basic and hydrophobic residues, a feature that is conserved among tarantula toxins. These results have important implications for regions of the toxin involved in recognizing membranes and voltage-sensor paddles, and for the mechanisms by which tarantula toxins alter the activity of different types of ion channels.

Indexed as

Ion Channel GatingAmino Acid SequenceAnimalsDNA Mutational AnalysisFluorescenceMembrane LipidsModels, MolecularMolecular Sequence DataPhosphatidylcholinesProtein BindingProtein Structure, SecondarySpectrum AnalysisSpider VenomsTryptophanMembrane LipidsPhosphatidylcholinesSpider VenomsTryptophan

Identifiers

PMID20643084
PMCPMC2905102
OpenAlexW2064950514

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.