Evidence map›Paper›PMID 20639338›Full record

ArticleJournal of bacteriology2010

Genetic and functional analyses of the mob operon on conjugative transposon CTn341 from Bacteroides spp.

Lindsay Peed, Anita C Parker, C Jeffrey Smith

Open access · greenAbstract read
In one paragraph

Article in Journal of bacteriology, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.1field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 17 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Lindsay PeedDepartment of Microbiology and Immunology, Brody School of Medicine, East Carolina University, Greenville, North Carolina 27834, USA.
Anita C Parker
C Jeffrey Smith
East Carolina University · US

Funding

B.FRAGILIS MULTIPLE DRUG RESISTANCE-ORIGIN AND CONTROLR01AI028884 · NIAID · EAST CAROLINA UNIVERSITY · PI SMITH, CHARLES J. · 1991 to 2005
$1.0M
NIAID NIH HHS R01 AI028884NIAID NIH HHS R01 AI-28884
6 · The paper itself

Abstract

Bacteroides are Gram-negative anaerobes indigenous to the intestinal tract of humans, and they are important opportunistic pathogens. Mobile genetic elements, such as conjugative transposons (CTns), have contributed to an increase in antibiotic resistance in these organisms. CTns are self-transmissible elements that belong to the superfamily of integrative and conjugative elements (ICEs). CTn341 is 52 kb; it encodes tetracycline resistance and its transfer is induced by tetracycline. The mobilization region of CTn341 was shown to be comprised of a three-gene operon, mobABC, and the transfer origin, oriT. The three genes code for a nicking accessory protein, a relaxase, and a VirD4-like coupling protein, respectively. The Mob proteins were predicted to mediate the formation of the relaxosome complex, nick DNA at the oriT, and shuttle the DNA/protein complex to the mating-pore apparatus. The results of mutational studies indicated that the three genes are required for maximal transfer of CTn341. Mob gene transcription was induced by tetracycline, and this regulation was mediated through the two-component regulatory system, RteAB. The oriT region of CTn341 was located within 100 bp of mobA, and a putative Bacteroides consensus nicking site was observed within this region. Mutation of the putative nick site resulted in a loss of transfer. This study demonstrated a role of the mobilization region for transfer of Bacteroides CTns and that tetracycline induction occurs for the mob gene operon, as for the tra gene operon(s), as shown previously.

Indexed as

Anti-Bacterial AgentsBacterial ProteinsBacteroidesBlotting, NorthernCarrier ProteinsDNA Transposable ElementsGene Expression Regulation, BacterialNucleotidyltransferasesOperonPolymerase Chain ReactionProtein BindingTetracyclineTrans-ActivatorsAnti-Bacterial AgentsBacterial ProteinsCarrier ProteinsDNA Transposable ElementsMobA protein, BacteroidesMobB protein, BacteroidesMobC protein, bacteriaNucleotidyltransferasesTetracyclineTrans-Activators

Identifiers

PMID20639338
PMCPMC2937426
OpenAlexW2102813305

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.