Evidence map›Paper›PMID 20639336›Full record

ArticleJournal of bacteriology2010

Separate DNA Pol II- and Pol IV-dependent pathways of stress-induced mutation during double-strand-break repair in Escherichia coli are controlled by RpoS.

Ryan L Frisch, Yang Su, P C Thornton, Janet L Gibson, Susan M Rosenberg, P J Hastings

Open access · greenAbstract read
In one paragraph

Article in Journal of bacteriology, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
2.8field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed, 53 citations in OpenAlex.

  1. Review
  2. Review
  3. Review
  4. RpoS and the bacterial general stress response.Microbiology and molecular biology reviews : MMBR · 2024
    Review
  5. Review
  6. Article
  7. Article
  8. Review
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  10. Article
  11. Article
  12. Article
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  15. Article
  16. Review
  17. Article
  18. Article
  19. Translesion DNA polymerases.Cold Spring Harbor perspectives in biology · 2013
    Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Ryan L FrischDepartment of Molecular and Human Genetics, Baylor College of Medicine,Baylor College of Medicine, Houston, Texas 77030-3411, USA.
Yang Su
P C Thornton
Janet L Gibson
Susan M Rosenberg
P J Hastings
Children's Cancer Center · US

Funding

MEDICAL GENETICS RESEARCH FELLOWSHIP PROGRAMT32GM007526 · NIGMS · BAYLOR COLLEGE OF MEDICINE · PI Brendan Lee · 1985 to 2026
$11.4M
MOLECULAR MECHANISMS /STRESS-INDUCED MUTATION /E. COLIR01GM053158 · NIGMS · BAYLOR COLLEGE OF MEDICINE · PI ROSENBERG, SUSAN M · 1997 to 2014
$7.4M
Mechanisms of Adaptive AmplificationR01GM064022 · NIGMS · BAYLOR COLLEGE OF MEDICINE · PI HASTINGS, PHILIP JOHN · 2001 to 2010
$2.3M
NIGMS NIH HHS R01 GM053158NIGMS NIH HHS R01 GM064022NIGMS NIH HHS R01-GM53158NIGMS NIH HHS R01-GM64022NIGMS NIH HHS T32 GM007526NIGMS NIH HHS T32-GM07526
6 · The paper itself

Abstract

Previous work showed that about 85% of stress-induced mutations associated with DNA double-strand break repair in carbon-starved Escherichia coli result from error-prone DNA polymerase IV (Pol IV) (DinB) and that the mutagenesis is controlled by the RpoS stress response, which upregulates dinB. We report that the remaining mutagenesis requires high-fidelity Pol II, and that this component also requires RpoS. The results identify a second DNA polymerase contributing to stress-induced mutagenesis and show that RpoS promotes mutagenesis by more than the simple upregulation of dinB.

Indexed as

DNA RepairBacterial ProteinsDNA Polymerase betaDNA Polymerase IIEscherichia coliEscherichia coli ProteinsMutagenesisMutationSigma FactorSignal TransductionBacterial ProteinsDNA Polymerase betaDNA Polymerase IIEscherichia coli ProteinsSigma Factorsigma factor KatF protein, Bacteria

Identifiers

PMID20639336
PMCPMC2937414
OpenAlexW2105303007

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.