Evidence map›Paper›PMID 20639329›Full record

ArticleJournal of bacteriology2010

Genome sequence of Fulvimarina pelagi HTCC2506T, a Mn(II)-oxidizing alphaproteobacterium possessing an aerobic anoxygenic photosynthetic gene cluster and Xanthorhodopsin.

Ilnam Kang, Hyun-Myung Oh, Seung-Il Lim, Steve Ferriera, Stephen J Giovannoni, Jang-Cheon Cho

Open access · greenAbstract read
In one paragraph

Article in Journal of bacteriology, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
2.2field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 22 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Review
  5. Article
  6. Article
  7. Nature's toolkit for microbial rhodopsin ion pumps.Proceedings of the National Academy of Sciences of the United States of America · 2014
    Article
  8. Functional characterization of flavobacteria rhodopsins reveals a unique class of light-driven chloride pump in bacteria.Proceedings of the National Academy of Sciences of the United States of America · 2014
    Article
  9. Article
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 2 countries.

Ilnam KangDivision of Biology and Ocean Sciences, Inha University, Incheon 402-751, Republic of Korea. chojc@inha.ac.kr.
Hyun-Myung Oh
Seung-Il Lim
Steve Ferriera
Stephen J Giovannoni
Jang-Cheon Cho
Inha University · KRJ. Craig Venter Institute · USOregon State University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Fulvimarina pelagi is a Mn(II)-oxidizing marine heterotrophic bacterium in the order Rhizobiales. Here we announce the draft genome sequence of F. pelagi HTCC2506(T), which was isolated from the Sargasso Sea by using dilution-to-extinction culturing. The genome sequence contained a xanthorhodopsin gene as well as a photosynthetic gene cluster, which suggests the coexistence of two different phototrophic mechanisms in a single microorganism.

Indexed as

AerobiosisAlphaproteobacteriaBacterial ProteinsGenome, BacterialManganeseMolecular Sequence DataMultigene FamilyOxidation-ReductionPhotosynthesisRhodopsins, MicrobialBacterial ProteinsManganeseRhodopsins, Microbial

Identifiers

PMID20639329
PMCPMC2937416
OpenAlexW2017779853

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.