Evidence map›Paper›PMID 20637316›Full record

ArticleBiochimica et biophysica acta2011

Stabilization and spectroscopic characterization of the dioxygen complex of wild-type cytochrome P4502B4 (CYP2B4) and its distal side E301Q, T302A and proximal side F429H mutants at subzero temperatures.

Roshan Perera, Masanori Sono, Ryan Kinloch, Haoming Zhang, Michael Tarasev, Sang-Choul Im, Lucy Waskell, John H Dawson

Abstract read
In one paragraph

Article in Biochimica et biophysica acta, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.6field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 10 citations in OpenAlex.

  1. Article
  2. Spectroscopic studies of the cytochrome P450 reaction mechanisms.Biochimica et biophysica acta. Proteins and proteomics · 2018
    Review
  3. Article
  4. Article
  5. Article
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

Roshan PereraDepartment of Chemistry and Biochemistry, University of South Carolina, Columbia, SC 29208, USA.
Masanori Sono
Ryan Kinloch
Haoming Zhang
Michael Tarasev
Sang-Choul Im
Lucy Waskell
John H Dawson
University of South Carolina · USUniversity of Michigan–Ann Arbor · USAnn Arbor VA Medical Center · US

Funding

PARTICIPATION OF CYTOCHROME B5 IN ANESTHETIC METABOLISMR01GM035533 · NIGMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI WASKELL, LUCY A · 1985 to 2010
$2.7M
SPECTROSCOPY AND MECHANISMS OF HEME-IRON OXYGENASESR01GM026730 · NIGMS · UNIVERSITY OF SOUTH CAROLINA AT COLUMBIA · PI DAWSON, JOHN H · 1985 to 2009
$2.1M
NIGMS NIH HHS GM 26730NIGMS NIH HHS GM 35533NIGMS NIH HHS R01 GM026730NIGMS NIH HHS R01 GM035533
6 · The paper itself

Abstract

Mammalian cytochrome P450 2B4 (CYP2B4) is a phenobarbital-inducible rabbit hepatic monooxygenase that catalyzes the N-demethylation of benzphetamine and metabolism of numerous other compounds. To probe the interactions of the heme environment and bound benzphetamine with the dioxygen (O₂) complex of CYP2B4, homogeneous O₂ complexes of the wild-type enzyme and three mutants at sites of conserved amino acids, two on the heme distal side (T302A and E301Q) and one on the proximal side (F429H), have been prepared and stabilized at ~-50°C in mixed solvents (60-70% v/v glycerol). We report that the magnetic circular dichroism and electronic absorption spectra of wild-type oxyferrous CYP2B4, in the presence and absence of substrate, are quite similar to those of the dioxygen complex of bacterial cytochrome P450-CAM (CYP101). However, the oxyferrous complexes of the T302A and E301Q CYP2B4 mutants have significantly perturbed electronic structure (~4 nm and ~3 nm red-shifted Soret features, respectively) compared to that of the wild-type oxyferrous complex. On the other hand, the heme proximal side mutant, CYP2B4 F429H, undergoes relatively facile conversion to a partially (~50%) denatured (P420) form upon reduction. The structural changes in the heme pocket environments of the CYP2B4 mutants that lead to the spectroscopic distinctions reported herein can be related to the differences in oxidation activities of wild-type CYP2B4 and its E301Q, T302A and F429H mutants.

Indexed as

MutationAmino Acid SubstitutionAnimalsAryl Hydrocarbon HydroxylasesBenzphetamineCatalytic DomainCircular DichroismCold TemperatureCytochrome P450 Family 2HemeIronModels, MolecularOrganometallic CompoundsOxygenProtein BindingProtein Structure, TertiaryAryl Hydrocarbon HydroxylasesBenzphetaminecytochrome P-450 CYP2B4 (rabbit)Cytochrome P450 Family 2HemeIronOrganometallic CompoundsOxygen

Identifiers

PMID20637316
PMCPMC5027956
OpenAlexW1996621792

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.