Evidence map›Paper›PMID 20637229›Full record

ArticleThe Journal of infection2010

Non-typeable Streptococcus pneumoniae carriage isolates genetically similar to invasive and carriage isolates expressing capsular type 14 in Brazilian infants.

Ana Lucia S Andrade, Cáritas M Franco, Juliana Lamaro-Cardoso, Maria Cláudia D P B André, Leandro L G Oliveira, André Kipnis, Cristyane G B B Rocha, João G Andrade, Sueli L A Alves, In H Park and 3 more

Open access · greenAbstract read
In one paragraph

Article in The Journal of infection, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.3field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 23 citations in OpenAlex.

  1. Trial
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  9. Mechanisms of genome evolution of Streptococcus.Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases · 2015
    Review
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 5 institutions in 2 countries.

Ana Lucia S AndradeDepartment of Community Health, Federal University of Goiás, Goiânia, Brazil. ana@iptsp.ufg.br
Cáritas M Franco
Juliana Lamaro-Cardoso
Maria Cláudia D P B André
Leandro L G Oliveira
André Kipnis
Cristyane G B B Rocha
João G Andrade
Sueli L A Alves
In H Park
Moon H Nahm
Samanta G Almeida
Maria Cristina C Brandileone
Universidade Federal de Goiás · BRFundação de Apoio a Pesquisa do Estado de Goiás · BRInstituto Adolfo Lutz · BRUniversity of Alabama at Birmingham · USPontifícia Universidade Católica de Goiás · BR

Funding

Impact of a new group 6 serotype on pneumococcal vaccinesR01AI031473 · NIAID · WASHINGTON UNIVERSITY · PI NAHM, MOON H. · 1991 to 2011
$1.7M
Pneumococcal capsule and host innate immunityR56AI031473 · NIAID · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI NAHM, MOON H. · 2012 to 2012
$366k
NIAID NIH HHS AI-31473NIAID NIH HHS R01 AI031473NIAID NIH HHS R56 AI031473
6 · The paper itself

Abstract

objectivesWe have recently found a high prevalence of non-typeable pneumococcal isolates (NTPn) circulating in day-care centers in Central Brazil, besides serotype 14 isolates. We therefore examined the genetic relationship among NTPn and serotype 14 from carriage and invasive pneumococcal isolates obtained from children attending emergency rooms enrolled in a population-based surveillance.

methodsThe isolates were characterized by Quellung reaction serotyping, PCR for the presence of pneumolysin and the loci for a capsule gene (cpsA) and the type 14 gene (cps14H) in all NTPn, and by multilocus sequence typing and pulsed field gel electrophoresis.

results87.2% of the isolates were clustered into nine clusters. The major cluster included 41 pneumococcal serotype 14 (28 carriage and 13 invasive isolates) and two NTPn related to the global pneumococcal clone Spain(9V)-3. Overall, 95.4% of the NTPn carriage strains were genetically related to carriage or invasive strains expressing serotype 14. A dominant NTPn lineage was found, that grouped 14 pneumococcal strains. Almost half of the multidrug-resistant isolates grouped into the NTPn cluster.

conclusionThese findings provide baseline data to assess the impact of the pneumococcal vaccination on the molecular epidemiology of Streptococcus pneumoniae. Changes in frequency of NTPn isolates and also genetic changes should be carefully monitored post vaccination, to detect potential vaccine-escape or replacement disease by capsule switched strains, especially in areas where colonization with NTPn has been frequently observed.

Indexed as

Bacterial Typing TechniquesBacterial ProteinsBrazilCarrier StateChild, PreschoolDNA FingerprintingElectrophoresis, Gel, Pulsed-FieldFemaleGenotypeHumansInfantInfant, NewbornMaleMolecular EpidemiologyPneumococcal InfectionsPneumococcal VaccinesBacterial ProteinsCpsA protein, Streptococcus pneumoniaeplY protein, Streptococcus pneumoniaePneumococcal VaccinesStreptolysinsVirulence Factors

Identifiers

PMID20637229
PMCPMC3769134
OpenAlexW2076922702

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.