Evidence map›Paper›PMID 20634979›Full record

ArticlePloS one2010

Gene expression analysis of forskolin treated basilar papillae identifies microRNA181a as a mediator of proliferation.

Corey S Frucht, Mohamed Uduman, Jamie L Duke, Steven H Kleinstein, Joseph Santos-Sacchi, Dhasakumar S Navaratnam

Abstract read
In one paragraph

Article in PloS one, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed.

  1. Review
  2. Article
  3. MicroRNAs and Presbycusis.Aging and disease · 2018
    Review
  4. Article
  5. Review
  6. Article
  7. MicroRNAs in sensorineural diseases of the ear.Frontiers in molecular neuroscience · 2013
    Review
  8. Article
  9. Article
  10. microRNAs: the art of silencing in the ear.EMBO molecular medicine · 2012
    Review
  11. Review
  12. Gene expression gradients along the tonotopic axis of the chicken auditory epithelium.Journal of the Association for Research in Otolaryngology : JARO · 2011
    Article
  13. Article
  14. Article
  15. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Corey S FruchtMedical Scientist Training Program, Yale School of Medicine, New Haven, Connecticut, United States of America.
Mohamed Uduman
Jamie L Duke
Steven H Kleinstein
Joseph Santos-Sacchi
Dhasakumar S Navaratnam

Funding

MEDICAL SCIENTIST TRAINING PROGRAMT32GM007205 · NIGMS · YALE UNIVERSITY · PI KAZMIERCZAK, BARBARA I · 1985 to 2019
$42.9M
MEDICAL INFORMATICS RESEARCH TRAINING AT YALET15LM007056 · NLM · YALE UNIVERSITY · PI Mark Bender Gerstein, LUCILA OHNO-MACHADO · 1987 to 2026
$22.2M
MEMBRANES PROPERTIES OF CELLS COMPRISING THE OHC SYSTEMR01DC000273 · NIDCD · YALE UNIVERSITY · PI SANTOS-SACCHI, JOSEPH R · 1989 to 2015
$6.8M
Structural correlates of prestin activity.R01DC008130 · NIDCD · YALE UNIVERSITY · PI NAVARATNAM, DHASAKUMAR S, SANTOS-SACCHI, JOSEPH R · 2007 to 2021
$6.1M
Studies on hair cell BK channelsR01DC007894 · NIDCD · YALE UNIVERSITY · PI NAVARATNAM, DHASAKUMAR S · 2006 to 2017
$3.6M
NIDCD NIH HHS DC 000273NIDCD NIH HHS DC 007894NIDCD NIH HHS DC 008130NIDCD NIH HHS R01 DC000273NIDCD NIH HHS R01 DC007894NIDCD NIH HHS R01 DC008130NIGMS NIH HHS 2T32GM07205NIGMS NIH HHS T32 GM007205NLM NIH HHS T15 LM007056NLM NIH HHS T15 LM07056
6 · The paper itself

Abstract

backgroundAuditory hair cells spontaneously regenerate following injury in birds but not mammals. A better understanding of the molecular events underlying hair cell regeneration in birds may allow for identification and eventually manipulation of relevant pathways in mammals to stimulate regeneration and restore hearing in deaf patients. METHODOLOGY/PRINCIPAL

findingsGene expression was profiled in forskolin treated (i.e., proliferating) and quiescent control auditory epithelia of post-hatch chicks using an Affymetrix whole-genome chicken array after 24 (n = 6), 48 (n = 6), and 72 (n = 12) hours in culture. In the forskolin-treated epithelia there was significant (p<0.05; >two-fold change) upregulation of many genes thought to be relevant to cell cycle control and inner ear development. Gene set enrichment analysis was performed on the data and identified myriad microRNAs that are likely to be upregulated in the regenerating tissue, including microRNA181a (miR181a), which is known to mediate proliferation in other systems. Functional experiments showed that miR181a overexpression is sufficient to stimulate proliferation within the basilar papilla, as assayed by BrdU incorporation. Further, some of the newly produced cells express the early hair cell marker myosin VI, suggesting that miR181a transfection can result in the production of new hair cells. CONCLUSIONS/SIGNIFICANCE: These studies have identified a single microRNA, miR181a, that can cause proliferation in the chicken auditory epithelium with production of new hair cells.

Indexed as

Hair Cells, AuditoryOrgan of CortiAnimalsCell ProliferationChickensColforsinEnzyme ActivatorsGene Expression RegulationMicroRNAsOligonucleotide Array Sequence AnalysisOrgan Culture TechniquesPolymerase Chain ReactionColforsinEnzyme ActivatorsMicroRNAs

Identifiers

PMID20634979
PMCPMC2901389

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.