Evidence map›Paper›PMID 20634802›Full record

ArticleEMBO reports2010

The structural plasticity of SCA7 domains defines their differential nucleosome-binding properties.

Jacques Bonnet, Ying-Hui Wang, Gianpiero Spedale, R Andrew Atkinson, Christophe Romier, Ali Hamiche, W W M Pim Pijnappel, H Th Marc Timmers, László Tora, Didier Devys and 1 more

Open access · bronzeAbstract read
In one paragraph

Article in EMBO reports, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
2.3field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 35 citations in OpenAlex.

  1. Review
  2. Review
  3. Review
  4. Molecular Targets and Therapeutic Strategies in Spinocerebellar Ataxia Type 7.Neurotherapeutics : the journal of the American Society for Experimental NeuroTherapeutics · 2019
    Review
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  6. Article
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  8. Article
  9. Article
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  12. Article
  13. Review
  14. Article
  15. A new chapter in the transcription SAGA.Current opinion in structural biology · 2011
    Review
  16. Review
  17. Article
  18. Article
  19. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 6 institutions in 2 countries.

Jacques BonnetDepartment of Functional Genomics, Institut de Génétique et de Biologie Moléculaire et Cellulaire (IGBMC), CNRS UMR 7104, INSERM U 964, Université de Strasbourg, Illkirch, France.
Ying-Hui Wang
Gianpiero Spedale
R Andrew Atkinson
Christophe Romier
Ali Hamiche
W W M Pim Pijnappel
H Th Marc Timmers
László Tora
Didier Devys
Bruno Kieffer
Inserm · FRCancer Genomics Centre · NLCentre National de la Recherche Scientifique · FRInstitut de génétique et de biologie moléculaire et cellulaire · FRUniversité de Strasbourg · FRUtrecht University · NL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

SAGA (Spt-Ada-Gcn5 acetyltransferase), a coactivator complex involved in chromatin remodelling, harbours both histone acetylation and deubiquitination activities. ATXN7/Sgf73 and ATXN7L3, two subunits of the SAGA deubiquitination module, contain an SCA7 domain characterized by an atypical zinc-finger. We show that the yeast Sgf73-SCA7 domain is not required to recruit Sgf73 into SAGA. Instead, it binds to nucleosomes, a property that is conserved in the human ATXN7-SCA7 domain but is lost in the ATXN7L3 domain. The solution structures of the SCA7 domain of both ATXN7 and ATXN7L3 reveal a new, common zinc-finger motif at the heart of two distinct folds, providing a molecular basis for the observed functional differences.

Indexed as

Protein Structure, SecondaryAmino Acid SequenceAnimalsAtaxin-7HumansModels, MolecularMolecular Sequence DataNerve Tissue ProteinsNuclear Magnetic Resonance, BiomolecularNucleosomesProtein BindingProtein Structure, TertiarySequence AlignmentTranscription FactorsUbiquitinationZinc FingersAtaxin-7ATXN7L3 protein, humanATXN7 protein, humanNerve Tissue ProteinsNucleosomesTranscription Factors

Identifiers

PMID20634802
PMCPMC2920448
OpenAlexW1991437326

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.