Evidence map›Paper›PMID 20630877›Full record

ArticleThe Journal of biological chemistry2010

ArPIKfyve regulates Sac3 protein abundance and turnover: disruption of the mechanism by Sac3I41T mutation causing Charcot-Marie-Tooth 4J disorder.

Ognian C Ikonomov, Diego Sbrissa, Jason Fligger, Khortnal Delvecchio, Assia Shisheva

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
3.1field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 47 citations in OpenAlex.

  1. Review
  2. Article
  3. Phosphoinositides in New Spaces.Cold Spring Harbor perspectives in biology · 2023
    Review
  4. Clinical features of homozygous FIG4-p.Ile41Thr Charcot-Marie-Tooth 4J patients.Annals of clinical and translational neurology · 2021
    Article
  5. Article
  6. Review
  7. Article
  8. Charcot Marie Tooth disease type 4J with complex central nervous system features.Annals of clinical and translational neurology · 2018
    Article
  9. Review
  10. Article
  11. Article
  12. Article
  13. Article
  14. Phosphatidylinositol 3,5-bisphosphate: low abundance, high significance.BioEssays : news and reviews in molecular, cellular and developmental biology · 2014
    Review
  15. Article
  16. Article
  17. Article
  18. Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Ognian C IkonomovDepartment of Physiology, Wayne State University School of Medicine, Detroit, Michigan 48201.
Diego SbrissaDepartment of Physiology, Wayne State University School of Medicine, Detroit, Michigan 48201.
Jason FliggerDepartment of Physiology, Wayne State University School of Medicine, Detroit, Michigan 48201.
Khortnal DelvecchioDepartment of Physiology, Wayne State University School of Medicine, Detroit, Michigan 48201.
Assia ShishevaDepartment of Physiology, Wayne State University School of Medicine, Detroit, Michigan 48201. Electronic address: ashishev@med.wayne.edu.
Wayne State University · US

Funding

FUNCTIONS OF ADIPOCYTE PIKFYVE AND ITS LIPID PRODUCTSR01DK058058 · NIDDK · WAYNE STATE UNIVERSITY · PI SHISHEVA, ASSIA · 2002 to 2011
$2.8M
NIDDK NIH HHS DK58058NIDDK NIH HHS R01 DK058058
6 · The paper itself

Abstract

The mammalian phosphatidylinositol (3,5)-bisphosphate (PtdIns(3,5)P(2)) phosphatase Sac3 and ArPIKfyve, the associated regulator of the PtdIns3P-5 kinase PIKfyve, form a stable binary complex that associates with PIKfyve in a ternary complex to increase PtdIns(3,5)P(2) production. Whether the ArPIKfyve-Sac3 subcomplex functions outside the PIKfyve context is unknown. Here we show that stable or transient expression of ArPIKfyve(WT) in mammalian cells elevates steady-state protein levels and the PtdIns(3,5)P(2)-hydrolyzing activity of Sac3, whereas knockdown of ArPIKfyve has the opposite effect. These manipulations do not alter the Sac3 mRNA levels, suggesting that ArPIKfyve might control Sac3 protein degradation. Inhibition of protein synthesis in COS cells by cycloheximide reveals remarkably rapid turnover of expressed Sac3(WT) (t((1/2)) = 18.8 min), resulting from a proteasome-dependent clearance as evidenced by the extended Sac3(WT) half-life upon inhibiting proteasome activity. Coexpression of ArPIKfyve(WT), but not the N- or C-terminal halves, prolongs the Sac3(WT) half-life consistent with enhanced Sac3 protein stability through association with full-length ArPIKfyve. We further demonstrate that mutant Sac3, harboring the pathogenic Ile-to-Thr substitution at position 41 found in patients with CMT4J disorder, is similar to Sac3(WT) with regard to PtdIns(3,5)P(2)-hydrolyzing activity, association with ArPIKfyve, or rapid proteasome-dependent clearance. Remarkably, however, neither is the steady-state Sac3(I41T) elevated nor is the Sac3(I41T) half-life extended by coexpressed ArPIKfyve(WT), indicating that unlike with Sac3(WT), ArPIKfyve fails to prevent Sac3(I41T) rapid loss. Together, our data indentify a novel regulatory mechanism whereby ArPIKfyve enhances Sac3 abundance by attenuating Sac3 proteasome-dependent degradation and suggest that a failure of this mechanism could be the primary molecular defect in the pathogenesis of CMT4J.

Indexed as

Mutation, Missense3T3-L1 CellsAmino Acid SubstitutionAnimalsCarrier ProteinsCharcot-Marie-Tooth DiseaseChlorocebus aethiopsCOS CellsFlavoproteinsGene Expression RegulationGene Knockdown TechniquesHalf-LifeHumansHydrolysisIntracellular Signaling Peptides and ProteinsMembrane ProteinsCarrier ProteinsFIG4 protein, humanFig4 protein, mouseFlavoproteinsIntracellular Signaling Peptides and ProteinsMembrane ProteinsMultiprotein Complexesphosphatidylinositol 3,5-diphosphatePhosphatidylinositol 3-KinasesPhosphatidylinositol PhosphatesPhosphoinositide PhosphatasesPhosphoric Monoester HydrolasesPIKFYVE protein, humanPikfyve protein, mouseProteasome Endopeptidase ComplexVAC14 protein, humanVac14 protein, mouse

Identifiers

PMID20630877
PMCPMC2930674
OpenAlexW2090101918

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.