Evidence map›Paper›PMID 20628040›Full record

ArticleGenetics2010

The rapidly evolving centromere-specific histone has stringent functional requirements in Arabidopsis thaliana.

Maruthachalam Ravi, Pak N Kwong, Ron M G Menorca, Joel T Valencia, Joseph S Ramahi, Jodi L Stewart, Robert K Tran, Venkatesan Sundaresan, Luca Comai, Simon W-L Chan

Open access · bronzeAbstract read
In one paragraph

Article in Genetics, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 59 papers.

0numbers the graph read from it
0cells of the map it votes in
59citing papers in PubMed
10.3field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

59 citing papers in PubMed, 114 citations in OpenAlex.

  1. Article
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  9. Review
  10. Article
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  12. Article
  13. The Roads to Haploid Embryogenesis.Plants (Basel, Switzerland) · 2023
    Review
  14. Review
  15. Centromere drive: model systems and experimental progress.Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology · 2022
    Review
  16. Review
  17. Review
  18. Article
  19. The N-terminal tail ofMolecular biology of the cell · 2021
    Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 1 institution in 1 country.

Maruthachalam RaviDepartment of Chemistry and Biochemistry, Universityof California, Los Angeles, CA 90095, USA.
Pak N Kwong
Ron M G Menorca
Joel T Valencia
Joseph S Ramahi
Jodi L Stewart
Robert K Tran
Venkatesan Sundaresan
Luca Comai
Simon W-L Chan
University of California, Davis · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Centromeres control chromosome inheritance in eukaryotes, yet their DNA structure and primary sequence are hypervariable. Most animals and plants have megabases of tandem repeats at their centromeres, unlike yeast with unique centromere sequences. Centromere function requires the centromere-specific histone CENH3 (CENP-A in human), which replaces histone H3 in centromeric nucleosomes. CENH3 evolves rapidly, particularly in its N-terminal tail domain. A portion of the CENH3 histone-fold domain, the CENP-A targeting domain (CATD), has been previously shown to confer kinetochore localization and centromere function when swapped into human H3. Furthermore, CENP-A in human cells can be functionally replaced by CENH3 from distantly related organisms including Saccharomyces cerevisiae. We have used cenh3-1 (a null mutant in Arabidopsis thaliana) to replace endogenous CENH3 with GFP-tagged variants. A H3.3 tail domain-CENH3 histone-fold domain chimera rescued viability of cenh3-1, but CENH3's lacking a tail domain were nonfunctional. In contrast to human results, H3 containing the A. thaliana CATD cannot complement cenh3-1. GFP-CENH3 from the sister species A. arenosa functionally replaces A. thaliana CENH3. GFP-CENH3 from the close relative Brassica rapa was targeted to centromeres, but did not complement cenh3-1, indicating that kinetochore localization and centromere function can be uncoupled. We conclude that CENH3 function in A. thaliana, an organism with large tandem repeat centromeres, has stringent requirements for functional complementation in mitosis.

Indexed as

ArabidopsisArabidopsis ProteinsBase SequenceCell Cycle ProteinsCentromereEvolution, MolecularGenetic Complementation TestHistonesKinetochoresPlant ProteinsPolymerase Chain ReactionProtein Structure, TertiaryRecombinant Fusion ProteinsSpecies SpecificityTransgenesArabidopsis ProteinsCell Cycle ProteinsHistonesPlant ProteinsRecombinant Fusion Proteins

Identifiers

PMID20628040
PMCPMC2954480
OpenAlexW2160531830

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.