Evidence map›Paper›PMID 20626626›Full record

ArticleJournal of viral hepatitis2011

Molecular characterization of intrahepatic and extrahepatic hepatitis B virus (HBV) reservoirs in patients on suppressive antiviral therapy.

C S Coffin, P M Mulrooney-Cousins, M G Peters, G van Marle, J P Roberts, T I Michalak, N A Terrault

Registry-linked trialOpen access · greenAbstract read
In one paragraph

Article in Journal of viral hepatitis, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT05168293 (Comparative Study of the Effect of Entecavir Versus Tenofovir on the Presence of HBV DNA in the Peripheral Blood Mononuclear Cells in Chronic Hepatitis B Patients), which is not on this map. Cited by 35 papers.

0numbers the graph read from it
0cells of the map it votes in
35citing papers in PubMed
1.9field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT05168293 unknown statusnot on this mapstarted 2022, after this paper: background citation

Comparative Study of the Effect of Entecavir Versus Tenofovir on the Presence of HBV DNA in the Peripheral Blood Mononuclear Cells in Chronic Hepatitis B Patients

TypeobservationalSponsorAssiut UniversityRan2022 to 2023Enrolled100ConditionsHepatitis B, ChronicArmsDetection of HBV-DNA in Peripheral Blood Mononuclear cells
3 · Its place in the literature

Who cites it

35 citing papers in PubMed, 73 citations in OpenAlex.

  1. Review
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  9. Review
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  11. Review
  12. Review
  13. HBV replication inhibitors.Antiviral research · 2020
    Review
  14. Review
  15. Review
  16. Article
  17. Review
  18. Article
  19. [The practice guideline on prophylaxis and treatment of hepatitis B for liver transplantation in China (2016 edition)].Zhonghua gan zang bing za zhi = Zhonghua ganzangbing zazhi = Chinese journal of hepatology · 2016
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 2 countries.

C S CoffinLiver Unit, Division of Gastroenterology, Department of Medicine, Faculty of Medicine, University of Calgary, AB, Canada. cscoffin@ucalgary.ca
P M Mulrooney-Cousins
M G Peters
G van Marle
J P Roberts
T I Michalak
N A Terrault
University of California, San Francisco · USMemorial University of Newfoundland · CAUniversity of Calgary · CA

Funding

UCSF Liver Core CenterP30DK026743 · NIDDK · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI Holger Willenbring · 1986 to 2026
$30.7M
NIDDK NIH HHS P30 DK026743
6 · The paper itself

Abstract

The hepatitis B virus (HBV) replicates via an error-prone reverse transcriptase generating potential drug-resistant quasispecies. The degree of HBV variability in liver vs peripheral blood mononuclear cells (PBMC) in patients on long-term suppressive antivirals is unclear. We characterized HBV replication, drug resistance and molecular diversity in patients with plasma HBV DNA undetectable by clinical assays. Explant liver (n=9), PBMC (n=6) and plasma (n=7) from nine such patients undergoing liver transplantation were evaluated for HBV genomes by sensitive PCR/nucleic acid hybridization assay. Cases with HBV DNA in liver and PBMC were tested for covalently closed circular DNA (HBV cccDNA). HBV polymerase (P) amplicons were cloned, sequenced and both P and overlapping surface (S) gene sequences were analysed. HBV DNA was detected in 43% (3/7) of plasma, 100% (9/9) of liver and 83% (5/6) of PBMC samples. HBV cccDNA was detected in all liver and one PBMC sample. Four patients had a clinical diagnosis of resistance. HBV P gene sequencing revealed 100% wild type (wt) in plasma (2/2), 83% wt in PBMC (5/6) but livers of 3/9 (33%) contained wt and 6/9 (66%) carried resistance to lamivudine and/or adefovir. The translated S gene revealed no changes affecting HBV antigenicity. Sequences from livers with antiviral resistant mutants revealed greater interpatient quasispecies diversity. Despite apparent HBV suppression, the liver continues to support HBV replication and extrahepatic HBV can be detected. PBMC may be a sanctuary for wt virus during antiviral therapy, while the liver harbours more drug-resistant viruses. Drug resistance correlates with intrahepatic viral diversity.

Indexed as

Liver TransplantationAdenineAdultAgedAntiviral AgentsAsian PeopleDNA, CircularDNA, ViralDrug ResistanceFemaleGene Products, polGenetic VariationGenome, ViralGuanineHepatitis BHepatitis B virusadefovirAdenineAntiviral AgentsDNA, CircularDNA, ViralentecavirGene Products, polGuaninehepatitis B virus X proteinLamivudineOrganophosphonatesP protein, Hepatitis B virusS envelope protein, hepatitis B virusTenofovirTrans-ActivatorsViral Envelope ProteinsViral Regulatory and Accessory Proteins

Identifiers

PMID20626626
PMCPMC4142495
OpenAlexW2100256719

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Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.