Evidence map›Paper›PMID 20624977›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2010

Surprising gene expression patterns within and between PDF-containing circadian neurons in Drosophila.

Elzbieta Kula-Eversole, Emi Nagoshi, Yuhua Shang, Joseph Rodriguez, Ravi Allada, Michael Rosbash

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 106 papers.

0numbers the graph read from it
0cells of the map it votes in
106citing papers in PubMed
5.5field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

106 citing papers in PubMed, 170 citations in OpenAlex.

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  11. Restoration of Sleep and Circadian Behavior by Autophagy Modulation in Huntington's Disease.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2023
    Article
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  20. The E3 ubiquitin ligase adaptorProceedings of the National Academy of Sciences of the United States of America · 2021
    Article

46 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 2 countries.

Elzbieta Kula-EversoleHoward Hughes Medical Institute, National Center for Behavioral Genomics, Department of Biology, Brandeis University, Waltham, MA 02454, USA.
Emi Nagoshi
Yuhua Shang
Joseph Rodriguez
Ravi Allada
Michael Rosbash
Howard Hughes Medical Institute · USBrandeis University · USNorthwestern University · US

Funding

GENETIC AND BIOCHEMICAL MECHANISMS OF REGULATIONT32GM007122 · NIGMS · BRANDEIS UNIVERSITY · PI LOVETT, SUSAN THOMAS · 1985 to 2020
$7.5M
Intercellular Signaling in the Circadian ClockR01NS059042 · NINDS · NORTHWESTERN UNIVERSITY · PI ALLADA, RAVI · 2008 to 2012
$1.6M
Howard Hughes Medical InstituteNIGMS NIH HHS T32 GM007122NINDS NIH HHS R01 NS059042
6 · The paper itself

Abstract

To compare circadian gene expression within highly discrete neuronal populations, we separately purified and characterized two adjacent but distinct groups of Drosophila adult circadian neurons: the 8 small and 10 large PDF-expressing ventral lateral neurons (s-LNvs and l-LNvs, respectively). The s-LNvs are the principal circadian pacemaker cells, whereas recent evidence indicates that the l-LNvs are involved in sleep and light-mediated arousal. Although half of the l-LNv-enriched mRNA population, including core clock mRNAs, is shared between the l-LNvs and s-LNvs, the other half is l-LNv- and s-LNv-specific. The distribution of four specific mRNAs is consistent with prior characterization of the four encoded proteins, and therefore indicates successful purification of the two neuronal types. Moreover, an octopamine receptor mRNA is selectively enriched in l-LNvs, and only these neurons respond to in vitro application of octopamine. Dissection and purification of l-LNvs from flies collected at different times indicate that these neurons contain cycling clock mRNAs with higher circadian amplitudes as well as at least a 10-fold higher fraction of oscillating mRNAs than all previous analyses of head RNA. Many of these cycling l-LNv mRNAs are well expressed but do not cycle or cycle much less well elsewhere in heads. The results suggest that RNA cycling is much more prominent in circadian neurons than elsewhere in heads and may be particularly important for the functioning of these neurons.

Indexed as

Gene Expression ProfilingAnimalsBiological ClocksCircadian RhythmDrosophila melanogasterDrosophila ProteinsFemaleGreen Fluorescent ProteinsMaleMicroscopy, FluorescenceNeuronsNeuropeptidesOligonucleotide Array Sequence AnalysisReceptors, Biogenic AmineReverse Transcriptase Polymerase Chain ReactionVentral Thalamic NucleiDrosophila ProteinsGreen Fluorescent ProteinsNeuropeptidesnorsynephrine receptorpdf protein, DrosophilaReceptors, Biogenic Amine

Identifiers

PMID20624977
PMCPMC2922133
OpenAlexW2016730858

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.