Evidence map›Paper›PMID 20623158›Full record

ReviewCellular and molecular life sciences : CMLS2010

Genome-wide analysis of plant metal transporters, with an emphasis on poplar.

Aude Migeon, Damien Blaudez, Olivia Wilkins, Barbara Montanini, Malcolm M Campbell, Pierre Richaud, Sébastien Thomine, Michel Chalot

Open access · greenAbstract readReview
In one paragraph

Review in Cellular and molecular life sciences : CMLS, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 33 papers.

0numbers the graph read from it
0cells of the map it votes in
33citing papers in PubMed
9.1field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

33 citing papers in PubMed, 130 citations in OpenAlex.

  1. Article
  2. Floral Development onPlants (Basel, Switzerland) · 2023
    Article
  3. Article
  4. PcNRAMP1 Enhances Cadmium Uptake and Accumulation inInternational journal of molecular sciences · 2022
    Article
  5. Article
  6. Article
  7. Review
  8. Review
  9. Review
  10. Comparative and Systematic Omics Revealed Low Cd Accumulation of PotatoInternational journal of molecular sciences · 2021
    Article
  11. Review
  12. Article
  13. Endomembrane Reorganization Induced by Heavy Metals.Plants (Basel, Switzerland) · 2020
    Review
  14. Genome-Wide Identification of Metal Tolerance Protein Genes inInternational journal of molecular sciences · 2020
    Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 5 institutions in 3 countries.

Aude MigeonUMR INRA/UHP "Tree-microbe Interactions", Nancy-University, Vandoeuvre-les-Nancy, France.
Damien Blaudez
Olivia Wilkins
Barbara Montanini
Malcolm M Campbell
Pierre Richaud
Sébastien Thomine
Michel Chalot
Université de Lorraine · FRUniversity of Toronto · CAAix-Marseille Université · FRCentre National de la Recherche Scientifique · FRUniversity of Parma · IT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The specific transport of metal ions, mediated by membrane-localized metal transporters, is of fundamental importance in all eukaryotes. Genome-wide analysis of metal transporters was undertaken, making use of whole genome sequences of the green alga Chlamydomonas reinhardtii, the moss Physcomitrella patens, the lycophyte Selaginella moellendorffii, the monocots rice and sorghum, and the dicots Arabidopsis thaliana, poplar, grapevine, as well as of the yeast Saccharomyces cerevisiae. A repertoire of 430 metal transporters was found in total across eight photosynthetic plants, as well as in S. cerevisiae. Seventy-two full-length metal transporter genes were identified in the Populus genome alone, which is the largest number of metal transporters genes identified in any single species to date. Diversification of some transporter family gene clusters appears to have occurred in a lineage-specific manner. Expression analysis of Populus metal transporters indicates that some family members show tissue-specific transcript abundance. Taken together, the data provide a picture into the diversification of these important gene families.

Indexed as

Genome, PlantCarrier ProteinsFungal ProteinsMetalsPhylogenyPlantsPopulusSaccharomyces cerevisiaeCarrier ProteinsFungal ProteinsMetals

Identifiers

PMID20623158
PMCPMC11115807
OpenAlexW2040497495

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.