The pros and cons of peptide-centric proteomics.

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

Who cites it

51 citing papers in PubMed, 1 synthesis or guideline pooled it.

1. Enhanced information output from shotgun proteomics data by protein quantification and peptide quality control (PQPQ).Molecular & cellular proteomics : MCP · 2011
   Pooled it
2. Potential of Proteomics in Forensic Phenotyping: A Focus on Biological Sex Estimation.Journal of proteome research · 2025
   Article
3. π-PrimeNovo: an accurate and efficient non-autoregressive deep learning model for de novo peptide sequencing.Nature communications · 2025
   Article
4. SpliceProt 2.0: A Sequence Repository of Human, Mouse, and Rat Proteoforms.International journal of molecular sciences · 2024
   Article
5. Assessment and Prediction of Human Proteotypic Peptide Stability for Proteomics Quantification.Analytical chemistry · 2023
   Article
6. Multiaspect Examinations of Possible Alternative Mappings of Identified Variant Peptides: A Case Study on the HEK293 Cell Line.ACS omega · 2022
   Article
7. Cataloguing the proteome: Current developments in single-molecule protein sequencing.Biophysics reviews · 2022
   Review
8. A multiplexed parallel reaction monitoring assay to monitor bovine pregnancy-associated glycoproteins throughout pregnancy and after gestation.PloS one · 2022
   Article
9. Advances in Proteomics Allow Insights Into Neuronal Proteomes.Frontiers in molecular neuroscience · 2021
   Review
10. Evaluation of linear models and missing value imputation for the analysis of peptide-centric proteomics.BMC bioinformatics · 2019
    Article
11. Expanding the Vocabulary of Peptide Signals inFrontiers in cellular and infection microbiology · 2019
    Review
12. Mining for Microbial Gems: Integrating Proteomics in the Postgenomic Natural Product Discovery Pipeline.Proteomics · 2018
    Review
13. Surfactant and Chaotropic Agent Assisted Sequential Extraction/On-Pellet Digestion (SCAD) for Enhanced Proteomics.Journal of proteome research · 2018
    Article
14. Mass Spectrometry-Based Proteomics to Unveil the Non-coding RNA World.Frontiers in molecular biosciences · 2018
    Review
15. Maillard Proteomics: Opening New Pages.International journal of molecular sciences · 2017
    Review
16. Top-down/Bottom-up Mass Spectrometry Workflow Using Dissolvable Polyacrylamide Gels.Analytical chemistry · 2017
    Article
17. Using bacterial genomes and essential genes for the development of new antibiotics.Biochemical pharmacology · 2017
    Review
18. De Novo MS/MS Sequencing of Native Human Antibodies.Journal of proteome research · 2017
    Article
19. Stable isotope dimethyl labelling for quantitative proteomics and beyond.Philosophical transactions. Series A, Mathematical, physical, and engineering sciences · 2016
    Review
20. Multiple Reaction Monitoring for Direct Quantitation of Intact Proteins Using a Triple Quadrupole Mass Spectrometer.Journal of the American Society for Mass Spectrometry · 2016
    Article

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

Authors and funding

3 authors.

Funding

No grant is acknowledged in the PubMed record.

Abstract

PubMed holds no abstract for this paper.

Indexed as