Evidence map›Paper›PMID 20622012›Full record

ArticleThe Journal of biological chemistry2010

Specific cleavage of the nuclear pore complex protein Nup62 by a viral protease.

Nogi Park, Tim Skern, Kurt E Gustin

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 72 papers.

0numbers the graph read from it
0cells of the map it votes in
72citing papers in PubMed
5.3field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

72 citing papers in PubMed, 100 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Viral interference of nucleocytoplasmic transport.The Journal of biological chemistry · 2025
    Review
  5. Article
  6. Article
  7. Article
  8. Article
  9. Review
  10. Virus Infection and mRNA Nuclear Export.International journal of molecular sciences · 2023
    Review
  11. Article
  12. Seneca Valley virus 3CVirulence · 2021
    Article
  13. Review
  14. Microorganisms · 2021
    Review
  15. Review
  16. Review
  17. Review
  18. Review
  19. Article
  20. Article

12 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 2 countries.

Nogi ParkDepartment of Basic Medical Sciences, University of Arizona College of Medicine-Phoenix, Phoenix, Arizona 85004, USA.
Tim Skern
Kurt E Gustin
University of Arizona · USMax Perutz Labs · AT

Funding

UNDERGRADUATE COLLEGE OUTREACH PROGRAMP20RR016454 · NCRR · UNIVERSITY OF IDAHO · PI CHASE, JENNIFER R · 2001 to 2011
$35.3M
TRANSCRIPTIONAL ATTENUATION OF THE TYPE I INTERFERON RESPONSE BY RHINOVIRUSP20RR015587 · NCRR · UNIVERSITY OF IDAHO · PI BOHACH, GREGORY A · 2000 to 2009
$19.0M
Inhibition of the dsRNA Response by PicornavirusesR56AI064432 · NIAID · UNIVERSITY OF IDAHO · PI GUSTIN, KURT E · 2007 to 2007
$339k
Inhibition of nucleo-cytoplasmic transport by rhinovirusR56AI059467 · NIAID · UNIVERSITY OF IDAHO · PI GUSTIN, KURT E · 2005 to 2005
$244k
Austrian Science Fund FWF P 17988NCRR NIH HHS P20 RR015587NCRR NIH HHS P20 RR016454NCRR NIH HHS P20 RR15587NIAID NIH HHS AI059467NIAID NIH HHS AI064432NIAID NIH HHS R56 AI059467NIAID NIH HHS R56 AI064432
6 · The paper itself

Abstract

Previous work has shown that several nucleoporins, including Nup62 are degraded in cells infected with human rhinovirus (HRV) and poliovirus (PV) and that this contributes to the disruption of certain nuclear transport pathways. In this study, the mechanisms underlying proteolysis of Nup62 have been investigated. Analysis of Nup62 in lysates from HRV-infected cells revealed that Nup62 was cleaved at multiple sites during viral infection. The addition of purified HRV2 2A protease (2A(pro)) to uninfected HeLa whole cell lysates resulted in the cleavage of Nup62, suggesting that 2A(pro) is a major contributor to Nup62 processing. The ability of purified 2A(pro) to cleave bacterially expressed and purified Nup62 demonstrated that 2A(pro) directly cleaves Nup62 in vitro. Site-directed mutagenesis of putative cleavage sites in Nup62 identified six different positions that are cleaved by 2A(pro) in vitro. This analysis revealed that 2A(pro) cleavage sites were located between amino acids 103 and 298 in Nup62 and suggested that the N-terminal FG-rich region of Nup62 was released from the nuclear pore complex in infected cells. Analysis of HRV- and PV-infected cells using domain-specific antibodies confirmed that this was indeed the case. These results are consistent with a model whereby PV and HRV disrupt nucleo-cytoplasmic trafficking by selectively removing FG repeat domains from a subset of nuclear pore complex proteins.

Indexed as

Active Transport, Cell NucleusCell NucleusCysteine EndopeptidasesHeLa CellsHumansMembrane GlycoproteinsMutagenesis, Site-DirectedNuclear Pore Complex ProteinsPoliomyelitisPoliovirusProtein Structure, TertiaryRhinovirusViral ProteinsCysteine EndopeptidasesMembrane GlycoproteinsNuclear Pore Complex Proteinsnuclear pore protein p62picornain 2A, PicornavirusViral Proteins

Identifiers

PMID20622012
PMCPMC2937907
OpenAlexW1964964279

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.