Evidence map›Paper›PMID 20622008›Full record

ArticleThe Journal of biological chemistry2010

A chromatin-remodeling protein is a component of fission yeast mediator.

Olga Khorosjutina, Paulina H Wanrooij, Julian Walfridsson, Zsolt Szilagyi, Xuefeng Zhu, Vera Baraznenok, Karl Ekwall, Claes M Gustafsson

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
1.5field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 23 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Mechanisms of Mediator complex action in transcriptional activation.Cellular and molecular life sciences : CMLS · 2013
    Review
  7. The Mediator complex and transcription elongation.Biochimica et biophysica acta · 2013
    Review
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. The Mediator complex and transcription regulation.Critical reviews in biochemistry and molecular biology
    Review
  14. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 2 countries.

Olga KhorosjutinaFrom the Division of Metabolic Diseases, Karolinska Institutet, SE-141 86 Stockholm, Sweden.
Paulina H Wanrooij
Julian Walfridsson
Zsolt Szilagyi
Xuefeng Zhu
Vera Baraznenok
Karl Ekwall
Claes M Gustafsson
Karolinska Institutet · SEUniversity of Gothenburg · SESödertörn University · SE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The multiprotein Mediator complex is an important regulator of RNA polymerase II-dependent genes in eukaryotic cells. In contrast to the situation in many other eukaryotes, the conserved Med15 protein is not a stable component of Mediator isolated from fission yeast. We here demonstrate that Med15 exists in a protein complex together with Hrp1, a CHD1 ATP-dependent chromatin-remodeling protein. The Med15-Hrp1 subcomplex is not a component of the core Mediator complex but can interact with the L-Mediator conformation. Deletion of med15(+) and hrp1(+) causes very similar effects on global steady-state levels of mRNA, and genome-wide analyses demonstrate that Med15 associates with a distinct subset of Hrp1-bound gene promoters. Our findings therefore indicate that Mediator may directly influence histone density at regulated promoters.

Indexed as

DNA HelicasesGene DeletionGenome, FungalGenome-Wide Association StudyHistonesMediator ComplexPromoter Regions, GeneticRNA, FungalRNA, MessengerSchizosaccharomycesSchizosaccharomyces pombe ProteinsTrans-ActivatorsDNA HelicasesHistoneshrp1 protein, S pombeMed15 protein, S pombeMediator ComplexRNA, FungalRNA, MessengerSchizosaccharomyces pombe ProteinsTrans-Activators

Identifiers

PMID20622008
PMCPMC2943280
OpenAlexW2005575818

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.