Evidence map›Paper›PMID 20620946›Full record

ArticleImmunity2010

Discrete roles of STAT4 and STAT6 transcription factors in tuning epigenetic modifications and transcription during T helper cell differentiation.

Lai Wei, Golnaz Vahedi, Hong-Wei Sun, Wendy T Watford, Hiroaki Takatori, Haydee L Ramos, Hayato Takahashi, Jonathan Liang, Gustavo Gutierrez-Cruz, Chongzhi Zang and 3 more

Open access · bronzeAbstract read
In one paragraph

Article in Immunity, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 198 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
198citing papers in PubMed, 1 pooled it
13.1field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

198 citing papers in PubMed, 1 synthesis or guideline pooled it, 319 citations in OpenAlex.

  1. Pooled it
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  5. Interleukin-24 in type 2 immune diseases.Frontiers in immunology · 2026
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  14. A distal enhancer of GATA3 regulates Th2 differentiation and allergic inflammation.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
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  17. Review
  18. Review
  19. Article
  20. The Role of TRIM24 in Allergic Rhinitis.Allergy, asthma & immunology research · 2023
    Article

138 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 2 institutions in 1 country.

Lai WeiMolecular Immunology and Inflammation Branch, NIAMS, National Institutes of Health, Bethesda MD 20892, USA.
Golnaz Vahedi
Hong-Wei Sun
Wendy T Watford
Hiroaki Takatori
Haydee L Ramos
Hayato Takahashi
Jonathan Liang
Gustavo Gutierrez-Cruz
Chongzhi Zang
Weiqun Peng
John J O'Shea
Yuka Kanno
National Institutes of Health · USGeorge Washington University · US

Funding

Stat transcription factors in immunoregulation and autoimmune diseaseZIAAR041159 · NIAMS · NATIONAL INSTITUTE OF ARTHRITIS AND MUSCULOSKELETAL AND SKIN DISEASES · PI O'SHEA, JOHN · 2009 to 2025
$49.3M
Translational Immunology research: a support for clinical immunological researchZICAR041181 · NIAMS · NATIONAL INSTITUTE OF ARTHRITIS AND MUSCULOSKELETAL AND SKIN DISEASES · PI GADINA, MASSIMO · 2009 to 2025
$31.5M
Intramural NIH HHS Z99 AR999999
6 · The paper itself

Abstract

Signal transducer and activator of transcription 4 (STAT4) and STAT6 are key factors in the specification of helper T cells; however, their direct roles in driving differentiation are not well understood. Using chromatin immunoprecipitation and massive parallel sequencing, we quantitated the full complement of STAT-bound genes, concurrently assessing global STAT-dependent epigenetic modifications and gene transcription by using cells from cognate STAT-deficient mice. STAT4 and STAT6 each bound over 4000 genes with distinct binding motifs. Both played critical roles in maintaining chromatin configuration and transcription of a core subset of genes through the combination of different epigenetic patterns. Globally, STAT4 had a more dominant role in promoting active epigenetic marks, whereas STAT6 had a more prominent role in antagonizing repressive marks. Clusters of genes negatively regulated by STATs were also identified, highlighting previously unappreciated repressive roles of STATs. Therefore, STAT4 and STAT6 play wide regulatory roles in T helper cell specification.

Indexed as

AnimalsCell DifferentiationChromatin ImmunoprecipitationEpigenesis, GeneticGene ExpressionGene Expression RegulationMiceMice, Inbred C57BLMice, KnockoutOligonucleotide Array Sequence AnalysisSTAT4 Transcription FactorSTAT6 Transcription FactorT-Lymphocytes, Helper-InducerTranscription, GeneticSTAT4 Transcription FactorSTAT6 Transcription Factor

Identifiers

PMID20620946
PMCPMC2904651
OpenAlexW1971249359

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.