Evidence map›Paper›PMID 20615205›Full record

ArticleBioTechniques2010

The nuclear translocation assay for intracellular protein-protein interactions and its application to the Bcr coiled-coil domain.

Andrew S Dixon, Carol S Lim

Open access · goldAbstract read
In one paragraph

Article in BioTechniques, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.9field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 15 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Review
  6. Article
  7. Article
  8. Disruption of Bcr-Abl coiled coil oligomerization by design.The Journal of biological chemistry · 2011
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Andrew S DixonDepartment of Pharmaceutics and Pharmaceutical Chemistry, University of Utah, Salt Lake City, 84108, USA.
Carol S Lim
University of Utah · US

Funding

UTAH REGIONAL CANCER CENTERP30CA042014 · NCI · UTAH STATE HIGHER EDUCATION SYSTEM--UNIVERSITY OF UTAH · PI Jared P Rutter · 1986 to 2026
$72.6M
Converting an Oncogene to an Apoptotic Factor by Manipulating Signal SequencesR01CA129528 · NCI · UNIVERSITY OF UTAH · PI LIM, CAROL S. · 2008 to 2012
$1.4M
NCI NIH HHS P30 CA042014NCI NIH HHS R01 CA129528
6 · The paper itself

Abstract

Protein interactions are critical for normal biological processes and molecular pathogenesis. While it is important to study these interactions, there are limited assays that are performed inside the cell, in the native cell environment, where the majority of protein-protein interactions take place. Here we present a method of studying protein interactions intracellularly using one protein of interest fused to a localization-controllable enhanced GFP (EGFP) construct and the other protein of interest fused to the red fluorescent protein, DsRed. Nuclear translocation of the EGFP construct is induced by addition of a ligand, and the difference in nuclear localization between the induced and noninduced states of the DsRed construct provides an indication of the interaction between the two proteins. This assay, the nuclear translocation assay (NTA), is introduced here as broadly applicable for studying protein interactions in the native environment inside cells and is demonstrated using forms of the coiled-coil domain from the breakpoint cluster region (Bcr) protein.

Indexed as

AnimalsCell LineCell NucleusChlorocebus aethiopsCloning, MolecularCOS CellsGene ExpressionGreen Fluorescent ProteinsLuminescent ProteinsProtein Interaction MappingProteinsProtein TransportRecombinant Fusion ProteinsRed Fluorescent Proteinenhanced green fluorescent proteinGreen Fluorescent ProteinsLuminescent ProteinsProteinsRecombinant Fusion ProteinsRed Fluorescent Protein

Identifiers

PMID20615205
PMCPMC2949290
OpenAlexW2171094894

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.