Evidence map›Paper›PMID 20610393›Full record

ArticleThe Journal of biological chemistry2010

Contribution of the peroxisomal acox gene to the dynamic balance of daumone production in Caenorhabditis elegans.

Hyoe-Jin Joo, Kwang-Youl Kim, Yong-Hyeon Yim, You-Xun Jin, Heekyeong Kim, Mun-Young Kim, Young-Ki Paik

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 39 papers.

0numbers the graph read from it
0cells of the map it votes in
39citing papers in PubMed
1.5field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

39 citing papers in PubMed, 73 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Natural genetic variation in the pheromone production ofProceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  6. Nematode Pheromones: Structures and Functions.Molecules (Basel, Switzerland) · 2023
    Review
  7. Article
  8. Chemical Signaling Regulates Axon Regeneration via the GPCR-Gqα Pathway inThe Journal of neuroscience : the official journal of the Society for Neuroscience · 2022
    Article
  9. Sea cucumber (Frontiers in nutrition · 2022
    Article
  10. Article
  11. Functional Characterization ofFrontiers in plant science · 2021
    Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Ascaroside Pheromones: Chemical Biology and Pleiotropic Neuronal Functions.International journal of molecular sciences · 2019
    Review
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Hyoe-Jin JooDepartment of Biochemistry, College of Life Sciences and Biotechnology, Yonsei Proteome Research Center, Yonsei University, Seoul 120-749, Korea.
Kwang-Youl Kim
Yong-Hyeon Yim
You-Xun Jin
Heekyeong Kim
Mun-Young Kim
Young-Ki Paik
Yonsei University · KRKorea Research Institute of Standards and Science · KRYonsei Proteome Research Center · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Dauer pheromones or daumones, which are signaling molecules that interrupt development and reproduction (dauer larvae) during unfavorable growth conditions, are essential for cellular homeostasis in Caenorhabditis elegans. According to earlier studies, dauer larva formation in strain N2 is enhanced by a temperature increase, suggesting the involvement of a temperature-dependent component in dauer pheromone biosynthesis or sensing. Several naturally occurring daumone analogs (e.g. daumones 1-3) have been identified, and these molecules are predicted to be synthesized in different physiological settings in this nematode. To elucidate the molecular regulatory system that may influence the dynamic balance of specific daumone production in response to sudden temperature changes, we characterized the peroxisomal acox gene encoding acyl-CoA oxidase, which is predicted to catalyze the first reaction during biosynthesis of the fatty acid component of daumones. Using acox-1(ok2257) mutants and a new, robust analytical method, we quantified the three most abundant daumones in worm bodies and showed that acox likely contributes to the dynamic production of various quantities of three different daumones in response to temperature increase, changes that are critical in C. elegans for coping with the natural environmental changes it faces.

Indexed as

Acyl-CoA OxidaseAnimalsCaenorhabditis elegansCaenorhabditis elegans ProteinsFatty AcidsPeroxisomesPheromonesReverse Transcriptase Polymerase Chain ReactionTemperatureAcyl-CoA OxidaseCaenorhabditis elegans Proteinsdaumone, C elegansFatty AcidsPheromones

Identifiers

PMID20610393
PMCPMC2937964
OpenAlexW2059081854

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.