Evidence map›Paper›PMID 20607374›Full record

ArticleThe protein journal2010

Effect of size, quaternary structure and translational error on the static and dynamic heterogeneity of beta-galactosidase and measurement of electrophoretic dynamic heterogeneity.

Douglas B Craig, Allison M Haslam, Harlyn J Silverstein, Miki Chikamatsu, Elnaz Shadabi, Ellert R Nichols

Abstract read
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In one paragraph

Article in The protein journal, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
0.1field-weighted citation impact, top 47% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 2 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Douglas B CraigChemistry Department, University of Winnipeg, Winnipeg, Manitoba R3B2E9, Canada. d.craig@uwinnipeg.ca
Allison M Haslam
Harlyn J Silverstein
Miki Chikamatsu
Elnaz Shadabi
Ellert R Nichols
University of Winnipeg · CAUniversity of Manitoba · CA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Single enzyme molecule assays were performed using capillary electrophoresis-based protocols on beta-galactosidase from Lactobacillus delbrueckii, Lactobacillus reuteri, Lactobacillus helveticus and Bacillus circulans. The enzyme was found to show static heterogeneity with respect to catalytic rate and the variance in rate increased with protein size. This is consistent with the proposal that random errors in translation may be an important underlying component of enzyme heterogeneity. Additionally these enzymes were found to show static heterogeneity with respect to electrophoretic mobility. Comparison of wild-type and rpsL E. coli beta-galactosidase expressed in the presence and absence of streptomycin suggested that increases in error do not result in detectable increases in the dynamic heterogeneity of activity with increasing temperature. Finally, a method was developed to measure the dynamic heterogeneity in electrophoretic mobility.

Indexed as

Protein BiosynthesisBacillusBacterial Proteinsbeta-GalactosidaseElectrophoresis, CapillaryEscherichia coliEscherichia coli ProteinsLactobacillusMolecular ConformationRecombinant ProteinsRibosomal ProteinsRibosomal Protein S9Spectrometry, FluorescenceStreptomycinStructure-Activity RelationshipTemperatureBacterial Proteinsbeta-GalactosidaseEscherichia coli ProteinsRecombinant ProteinsRibosomal ProteinsRibosomal Protein S9RpsI protein, E coliRpsL protein, E coliStreptomycin

Identifiers

PMID20607374
OpenAlexW1995615397

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.