Evidence map›Paper›PMID 20606261›Full record

ArticleActa crystallographica. Section D, Biological crystallography2010

Structure of the Escherichia coli RNA polymerase alpha subunit C-terminal domain.

Samuel Lara-González, Jens J Birktoft, Catherine L Lawson

Abstract read
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Article in Acta crystallographica. Section D, Biological crystallography, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Samuel Lara-GonzálezDepartment of Chemistry and Chemical Biology, Rutgers University, Piscataway, NJ 08854, USA.
Jens J Birktoft
Catherine L Lawson

Funding

NUCLEIC ACID STRUCTURES AND INTERACTIONSR01GM021589 · NIGMS · RUTGERS THE ST UNIV OF NJ NEW BRUNSWICK · PI LAWSON, CATHERINE L · 1985 to 2009
$2.7M
NIGMS NIH HHS GM21589NIGMS NIH HHS R01 GM021589
6 · The paper itself

Abstract

The alpha subunit C-terminal domain (alphaCTD) of RNA polymerase (RNAP) is a key element in transcription activation in Escherichia coli, possessing determinants responsible for the interaction of RNAP with DNA and with transcription factors. Here, the crystal structure of E. coli alphaCTD (alpha subunit residues 245-329) determined to 2.0 A resolution is reported. Crystals were obtained after reductive methylation of the recombinantly expressed domain. The crystals belonged to space group P2(1) and possessed both pseudo-translational symmetry and pseudo-merohedral twinning. The refined coordinate model (R factor = 0.193, R(free) = 0.236) has improved geometry compared with prior lower resolution determinations of the alphaCTD structure [Jeon et al. (1995), Science, 270, 1495-1497; Benoff et al. (2002), Science, 297, 1562-1566]. An extensive dimerization interface formed primarily by N- and C-terminal residues is also observed. The new coordinates will facilitate the improved modeling of alphaCTD-containing multi-component complexes visualized at lower resolution using X-ray crystallography and electron-microscopy reconstruction.

Indexed as

Amino Acid SequenceCrystallography, X-RayDNA-Directed RNA PolymerasesEscherichia coliModels, MolecularMolecular Sequence DataProtein Structure, QuaternaryProtein Structure, TertiaryDNA-Directed RNA PolymerasesRNA polymerase alpha subunit

Identifiers

PMID20606261
PMCPMC2897699

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.