Evidence map›Paper›PMID 20606025›Full record

ArticleThe British journal of ophthalmology2010

The effect of genetic variants in SERPING1 on the risk of neovascular age-related macular degeneration.

A Y Lee, M Kulkarni, A M Fang, S Edelstein, M P Osborn, M A Brantley

Abstract read
In one paragraph

Article in The British journal of ophthalmology, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed, 1 pooled it
4.9field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 1 synthesis or guideline pooled it, 32 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Gut Microbes and Eye Disease.Ophthalmic research · 2022
    Review
  4. Article
  5. Article
  6. Risk factors and biomarkers of age-related macular degeneration.Progress in retinal and eye research · 2016
    Review
  7. Review
  8. Article
  9. Article
  10. Review
  11. Homozygosity for the +674C>T polymorphism on VEGF gene is associated with age-related macular degeneration in a Brazilian cohort.Graefe's archive for clinical and experimental ophthalmology = Albrecht von Graefes Archiv fur klinische und experimentelle Ophthalmologie · 2012
    Article
  12. Review
  13. Article
  14. Article
  15. Personalized genomic medicine.Internal and emergency medicine · 2010
    Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

A Y LeeDepartment of Ophthalmology and Visual Sciences, Washington University School of Medicine, St Louis, Missouri 63110, USA.
M Kulkarni
A M Fang
S Edelstein
M P Osborn
M A Brantley
Retina Institute · US

Funding

Washington University Institute of Clinical and Translational Sciences (UL1)UL1RR024992 · NCRR · WASHINGTON UNIVERSITY · PI EVANOFF, BRADLEY A · 2007 to 2011
$45.4M
WASHINGTON UNIVERSITY CENTER VISION RESEARCHP30EY002687 · NEI · WASHINGTON UNIVERSITY · PI Philip Andrew Ruzycki · 1985 to 2026
$18.4M
Predoctoral Clinical Research Trainin**(RMI)T32RR023255 · NCRR · WASHINGTON UNIVERSITY · PI PICCIRILLO, JAY F. · 2005 to 2007
$1.4M
NCRR NIH HHS T32 RR023255NCRR NIH HHS T32RR023255NCRR NIH HHS UL1 RR024992NCRR NIH HHS UL1RR024992NEI NIH HHS 5 P30 EY02687NEI NIH HHS P30 EY002687
6 · The paper itself

Abstract

purposeGenetic factors influence an individual's risk for developing age-related macular degeneration (AMD), a leading cause of irreversible vision loss. Previous studies investigating the potential association between all AMD subtypes and the SERPING1 gene, which encodes a key regulator of the classic complement pathway, have yielded conflicting results. The purpose of this study is to determine whether variations in SERPING1 are associated with neovascular AMD.

methodsA total of 556 patients with neovascular AMD and 256 ethnically matched controls were genotyped for polymorphisms in SERPING1. A tagging single nucleotide polymorphism (tSNP) approach was used to cover the SERPING1 gene plus 2 kb on each side, spanning the promoter and the 3' untranslated regions. Ten SNPs with a minor allele frequency of 0.10 were covered by three tSNPs (rs1005510, rs11603020, rs2511989).

resultsSERPING1 SNPs rs1005510 and rs2511989 were significantly associated with neovascular AMD in our cohort, with rs1005510 conferring an adverse risk effect (OR 1.49, 95% CI 1.18 to 1.88) and rs2511989 conferring a protective effect (OR 0.73, 95% CI 0.59 to 0.90). For both tSNPs, logistic regression of individual genotypes demonstrated statistically significant stepwise changes in the risk of developing AMD. Combined analysis of rs1005510 with variants in CFH and HTRA1 confirmed an independent risk effect. The rs11603020 variant had no effect on AMD susceptibility in this study (OR 0.98, 95% CI 0.78 to 1.24).

conclusionsThe SERPING1 gene is comprehensively investigated in this study (using three tSNPs), and its genetic variants are evaluated in the largest neovascular AMD cohort to date. The hypothesis that SERPING1 has a modest effect on the risk of neovascular AMD is supported by our results.

Indexed as

AgedChoroidal NeovascularizationComplement C1 Inactivator ProteinsComplement C1 Inhibitor ProteinFemaleGenetic Predisposition to DiseaseGenotypeHumansMacular DegenerationMalePolymorphism, Single NucleotideRetrospective StudiesComplement C1 Inactivator ProteinsComplement C1 Inhibitor ProteinSERPING1 protein, human

Identifiers

PMID20606025
PMCPMC3655725
OpenAlexW2083074243

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.