Evidence map›Paper›PMID 20602356›Full record

ArticleProteins2010

The catch bond mechanism between von Willebrand factor and platelet surface receptors investigated by molecular dynamics simulations.

Gianluca Interlandi, Wendy Thomas

Abstract read
In one paragraph

Article in Proteins, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed.

  1. De novo DNA-based catch bonds.Nature chemistry · 2024
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  10. TheProceedings of the National Academy of Sciences of the United States of America · 2020
    Article
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  17. Force is a signal that cells cannot ignore.Molecular biology of the cell · 2014
    Review
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  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Gianluca InterlandiDepartment of Bioengineering, University of Washington, Seattle, Washington 98195, USA.
Wendy Thomas

Funding

Regulation of von Willebrand Factor - platelet binding by Force and Interdomain IR01HL106074 · NHLBI · UNIVERSITY OF WASHINGTON · PI THOMAS, WENDY E · 2011 to 2015
$2.1M
NHLBI NIH HHS R01 HL106074
6 · The paper itself

Abstract

The multi-domain protein von Willebrand factor is crucial in the blood coagulation process at high shear. The A1 domain binds to the platelet surface receptor glycoprotein Ibalpha (GpIb alpha) and this interaction is known to be strengthened by tensile force. The molecular mechanism behind this observation was investigated here by molecular dynamics simulations. The results suggest that the proteins unbind through two distinct pathways depending whether a high-tensile force is applied or whether unbinding happens through thermal fluctuations. In the high-force unbinding pathway the A1 domain was observed to rotate away from the C-terminus of GpIb alpha. In contrast, during thermal unbinding the A1 domain rotated in the opposite direction as in the high-force pathway and the distance between the terminii of A1 and the GpIb alpha C-terminus shortened. This shortening was reduced and the lifetime of the bond extended if a moderate tensile force was applied across the complex. This suggests that the thermal unbinding pathway is inhibited by a moderate tensile force which is in agreement with the catch bond property shown previously in single molecule experiments. A designed mutant of GpIb alpha is suggested here in order to test in vitro the thermal unbinding pathway observed in silico.

Indexed as

Molecular Dynamics SimulationBiomechanical PhenomenaHot TemperatureHydrogen BondingIsoantigensMembrane GlycoproteinsMutationPlatelet Glycoprotein GPIb-IX ComplexPrincipal Component AnalysisProtein BindingProtein Conformationvon Willebrand Factoradhesion receptorIsoantigensMembrane GlycoproteinsPlatelet Glycoprotein GPIb-IX Complexvon Willebrand Factor

Identifiers

PMID20602356
PMCPMC6107302

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.