Evidence map›Paper›PMID 20600627›Full record

ArticleBiochimica et biophysica acta2010

A monovalent agonist of TrkA tyrosine kinase receptors can be converted into a bivalent antagonist.

Fouad Brahimi, Jing Liu, Andrey Malakhov, Shafinaz Chowdhury, Enrico O Purisima, Ljubica Ivanisevic, Antoine Caron, Kevin Burgess, H Uri Saragovi

Open access · bronzeAbstract read
In one paragraph

Article in Biochimica et biophysica acta, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
0.7field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 19 citations in OpenAlex.

  1. Selective Modulation of Trk Receptors byACS chemical neuroscience · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 2 countries.

Fouad BrahimiLady Davis Institute-Jewish General Hospital, Pharmacology and Therapeutics, Oncology and the Cancer Center. McGill University, Canada.
Jing Liu
Andrey Malakhov
Shafinaz Chowdhury
Enrico O Purisima
Ljubica Ivanisevic
Antoine Caron
Kevin Burgess
H Uri Saragovi
McGill University · CATexas A&M University · USJewish General Hospital · CANational Academies of Sciences, Engineering, and Medicine · US

Funding

Design and Synthesis of Functional NGF PeptidomimeticsR01MH070040 · NIMH · TEXAS A&M UNIVERSITY SYSTEM · PI BURGESS, KEVIN · 2005 to 2009
$1.9M
Evolving Libraries of Bivalent Compounds (RMI)P41GM076261 · NIGMS · TEXAS A&M UNIVERSITY SYSTEM · PI BURGESS, KEVIN · 2005 to 2007
$1.0M
CIHR MOP 192060NIGMS NIH HHS GM096261NIGMS NIH HHS P41 GM076261NIMH NIH HHS MH070040NIMH NIH HHS R01 MH070040
6 · The paper itself

Abstract

backgroundReceptor tyrosine kinases (RTK) act through dimerization. Previously it was thought that only bivalent ligands could be agonistic, whereas monovalent ligands should be antagonistic. This notion changed after the demonstration that monovalent ligands can be agonistic, including our report of a small molecule monovalent ligand "D3" that is a partial agonist of the NGF receptor TrkA. A bivalent "D3-linker-D3" was expected to increase agonism.

methodsDimeric analogs were synthesized and tested in binding, biochemical, and biological assays.

resultsOne analog, 1-ss, binds TrkA with higher affinity than D3 and induces or stabilizes receptor dimers. However, 1-ss exhibited antagonistic activity, through two mechanisms. One mechanism is that 1-ss blocks NGF binding, unlike D3 which is non-competitive. Inhibition of NGF binding may be due to the linker of 1-ss filling the inter-receptor space that NGF traverses before docking. In a second mechanism, 1-ss acts as a pure antagonist, inhibiting NGF-independent TrkA activity in cells over-expressing receptors. Inhibition is likely due to 1-ss "freezing" the TrkA dimer in the inactive state.

conclusionsDimerization of an RTK can result in antagonism, through two independent mechanisms. GENERAL SIGNIFICANCE: we report a small molecule monovalent agonist being converted to a bivalent antagonist.

Indexed as

AnimalsHumansMiceNerve Growth FactorNIH 3T3 CellsOligopeptidesProtein BindingProtein Kinase InhibitorsProtein MultimerizationReceptor, trkANerve Growth FactorNGF protein, humanOligopeptidesProtein Kinase InhibitorsReceptor, trkA

Identifiers

PMID20600627
PMCPMC2943489
OpenAlexW2046749288

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.