Evidence map›Paper›PMID 20597679›Full record

ArticleClinical infectious diseases : an official publication of the Infectious Diseases Society of America2010

The prevalence of fluoroquinolone resistance mechanisms in colonizing Escherichia coli isolates recovered from hospitalized patients.

Ebbing Lautenbach, Joshua P Metlay, Xiangqun Mao, Xiaoyan Han, Neil O Fishman, Warren B Bilker, Pam Tolomeo, Mary Wheeler, Irving Nachamkin

Abstract read
In one paragraph

Article in Clinical infectious diseases : an official publication of the Infectious Diseases Society of America, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed.

  1. Role of the Water-Metal Ion Bridge in Quinolone Interactions withInternational journal of molecular sciences · 2023
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  2. Review
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  15. Review
  16. Prevalence and risk factors for quinolone resistance among Escherichia coli strains isolated from males with community febrile urinary tract infection.European journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology · 2012
    Article
  17. Review
  18. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

9 authors.

Ebbing LautenbachDivisions of Infectious Diseases, University of Pennsylvania School of Medicine, Philadelphia, PA, USA. ebbing@mail.med.upenn.edu
Joshua P Metlay
Xiangqun Mao
Xiaoyan Han
Neil O Fishman
Warren B Bilker
Pam Tolomeo
Mary Wheeler
Irving Nachamkin

Funding

Clinical Impact of Quinolone-Resistant E.coli carriageR01AI055008 · NIAID · UNIVERSITY OF PENNSYLVANIA · PI LAUTENBACH, EBBING · 2004 to 2007
$2.6M
Neighborhood level determinants of pneumococcal disease transmissionK24AI073957 · NIAID · UNIVERSITY OF PENNSYLVANIA · PI METLAY, JOSHUA P · 2008 to 2012
$1.0M
Mentoring and patient-oriented research in antimicrobial resistanceK24AI080942 · NIAID · UNIVERSITY OF PENNSYLVANIA · PI LAUTENBACH, EBBING · 2009 to 2013
$853k
CTRS FOR EDUCATION AND RESEARCH ON THERAPEUTICS (CERTS)U18HS010399 · AHRQ · UNIVERSITY OF PENNSYLVANIA · PI STROM, BRIAN LESLIE · 2000 to 2006
$800k
AHRQ HHS U18 HS010399AHRQ HHS U18-HS10399NIAID NIH HHS K24 AI073957NIAID NIH HHS K24-AI073957NIAID NIH HHS K24 AI080942NIAID NIH HHS K24-AI080942NIAID NIH HHS R01 AI055008NIAID NIH HHS R01-AI055008
6 · The paper itself

Abstract

backgroundFluoroquinolones are the most commonly prescribed antimicrobials. The epidemiology of fecal colonization with Escherichia coli demonstrating reduced susceptibility to fluoroquinolones remains unclear.

methodsDuring a 3-year period (15 September 2004 through 19 October 2007), all patients hospitalized for >3 days were approached for fecal sampling. All E. coli isolates with reduced susceptibility to fluoroquinolones (minimum inhibitory concentration [MIC] of levofloxacin, 0.125 microg/mL) were identified. We characterized gyrA and parC mutations and organic solvent tolerance. Isolates were compared using pulsed-field gel electrophoresis.

resultsOf 353 patients colonized with E. coli demonstrating reduced fluoroquinolone susceptibility, 300 (85.0%) had 1 gyrA mutation, 161 (45.6%) had 1 parC mutation, and 171 (48.6%) demonstrated organic solvent tolerance. The mean numbers of total mutations (ie, gyrA and parC) for E. coli isolates with a levofloxacin MIC of 8 microg/mL versus <8.0 microg/mL were 2.70 and 0.82 (P < .001). Of the 136 E. coli isolates with a levofloxacin MIC of 8 microg/mL, 90 (66.2%) demonstrated a nalidixic acid MIC of 16 microg/mL. Significant differences were found over time in the proportion of E. coli isolates demonstrating gyrA mutation, parC mutation, and organic solvent tolerance. There was little evidence of clonal spread of isolates. Conclusions. Gastrointestinal tract colonization with E. coli demonstrating reduced susceptibility to levofloxacin is common. Although 40% of study isolates exhibited a levofloxacin MIC of <8 microg/mL (and would thus be missed by current Clinical and Laboratory Standards Institute breakpoints), nalidixic acid resistance may be a useful marker for detection of such isolates. Significant temporal changes occurred in the proportion of isolates exhibiting various resistance mechanisms.

Indexed as

Drug Resistance, BacterialAgedAmino Acid SubstitutionAnti-Bacterial AgentsBacterial Typing TechniquesCarrier StateDNA, BacterialDNA FingerprintingDNA GyraseDNA Topoisomerase IVElectrophoresis, Gel, Pulsed-FieldEscherichia coliEscherichia coli InfectionsEscherichia coli ProteinsFecesFemaleAnti-Bacterial AgentsDNA, BacterialDNA GyraseDNA Topoisomerase IVEscherichia coli ProteinsFluoroquinolones

Identifiers

PMID20597679
PMCPMC2897836

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.