Evidence map›Paper›PMID 20595611›Full record

ArticleScience (New York, N.Y.)2010

Sequencing of 50 human exomes reveals adaptation to high altitude.

Xin Yi, Yu Liang, Emilia Huerta-Sanchez, Xin Jin, Zha Xi Ping Cuo, John E Pool, Xun Xu, Hui Jiang, Nicolas Vinckenbosch, Thorfinn Sand Korneliussen and 60 more

Open access · greenAbstract read
In one paragraph

Article in Science (New York, N.Y.), 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 897 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
897citing papers in PubMed, 1 pooled it
53.8field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

897 citing papers in PubMed, 1 synthesis or guideline pooled it, 1,651 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. A second-generation "hypoxia in a pill" rescues neurodegenerative phenotypes across distinct mouse models.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
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  7. MN•CS•IO System: Cross-Species Study for HBB Function in High-Altitude Hypoxia Adaptation.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2026
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  10. Variants ofLife science alliance · 2026
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837 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

70 authors at 5 institutions in 3 countries.

Xin YiBGI-Shenzhen, Shenzhen 518083, China.
Yu Liang
Emilia Huerta-Sanchez
Xin Jin
Zha Xi Ping Cuo
John E Pool
Xun Xu
Hui Jiang
Nicolas Vinckenbosch
Thorfinn Sand Korneliussen
Hancheng Zheng
Tao Liu
Weiming He
Kui Li
Ruibang Luo
Xifang Nie
Honglong Wu
Meiru Zhao
Hongzhi Cao
Jing Zou
Ying Shan
Shuzheng Li
Qi Yang
Asan
Peixiang Ni
Geng Tian
Junming Xu
Xiao Liu
Tao Jiang
Renhua Wu
Guangyu Zhou
Meifang Tang
Junjie Qin
Tong Wang
Shuijian Feng
Guohong Li
Huasang
Jiangbai Luosang
Wei Wang
Fang Chen
Yading Wang
Xiaoguang Zheng
Zhuo Li
Zhuoma Bianba
Ge Yang
Xinping Wang
Shuhui Tang
Guoyi Gao
Yong Chen
Zhen Luo
Lamu Gusang
Zheng Cao
Qinghui Zhang
Weihan Ouyang
Xiaoli Ren
Huiqing Liang
Huisong Zheng
Yebo Huang
Jingxiang Li
Lars Bolund
Karsten Kristiansen
Yingrui Li
Yong Zhang
Xiuqing Zhang
Ruiqiang Li
Songgang Li
Huanming Yang
Rasmus Nielsen
Jun Wang
Jian Wang
BGI Group (China) · CNUniversity of Chinese Academy of Sciences · CNUniversity of California, Berkeley · USUniversity of Copenhagen · DKShenzhen University · CN

Funding

Population Genetic Inferences From Dense Genotype DataR01HG003229 · NHGRI · CORNELL UNIVERSITY ITHACA · PI BUSTAMANTE, CARLOS DANIEL, CLARK, ANDREW G · 2004 to 2013
$4.8M
Inferring Multiple-SNP Disease Association with DNA Resequence DataR01MH084695 · NIMH · CORNELL UNIVERSITY · PI BUSTAMANTE, CARLOS DANIEL, CLARK, ANDREW G · 2008 to 2010
$1.1M
Cellular mechanisms of HPA axis neuroadaptations in alcohol dependenceR21AA022707 · NIAAA · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI SPIGELMAN, IGOR · 2014 to 2015
$383k
NHGRI NIH HHS R01 HG003229NHGRI NIH HHS R01HG003229NIAAA NIH HHS R21 AA022707NIMH NIH HHS R01 MH084695PHS HHS R01MHG084695
6 · The paper itself

Abstract

Residents of the Tibetan Plateau show heritable adaptations to extreme altitude. We sequenced 50 exomes of ethnic Tibetans, encompassing coding sequences of 92% of human genes, with an average coverage of 18x per individual. Genes showing population-specific allele frequency changes, which represent strong candidates for altitude adaptation, were identified. The strongest signal of natural selection came from endothelial Per-Arnt-Sim (PAS) domain protein 1 (EPAS1), a transcription factor involved in response to hypoxia. One single-nucleotide polymorphism (SNP) at EPAS1 shows a 78% frequency difference between Tibetan and Han samples, representing the fastest allele frequency change observed at any human gene to date. This SNP's association with erythrocyte abundance supports the role of EPAS1 in adaptation to hypoxia. Thus, a population genomic survey has revealed a functionally important locus in genetic adaptation to high altitude.

Indexed as

AltitudeExonsGenome, HumanSelection, GeneticAcclimatizationAsian PeopleBasic Helix-Loop-Helix ProteinsBayes TheoremChinaEndothelial PAS Domain-Containing Protein 1Erythrocyte CountEthnicityFemaleGene FrequencyGenetic Association StudiesHemoglobinsBasic Helix-Loop-Helix ProteinsEndothelial PAS Domain-Containing Protein 1HemoglobinsOxygen

Identifiers

PMID20595611
PMCPMC3711608
OpenAlexW2147575903

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.