Evidence map›Paper›PMID 20594377›Full record

ArticlePsychological medicine2011

Linkage scan of nicotine dependence in the University of California, San Francisco (UCSF) Family Alcoholism Study.

I R Gizer, C L Ehlers, C Vieten, K L Seaton-Smith, H S Feiler, J V Lee, S K Segall, D A Gilder, K C Wilhelmsen

Abstract read
In one paragraph

Article in Psychological medicine, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.2field-weighted citation impact, top 36% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 5 citations in OpenAlex.

  1. Review
  2. Article
  3. The genetics of substance dependence.Annual review of genomics and human genetics · 2012
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 6 institutions in 1 country.

I R GizerDepartment of Genetics, University of North Carolina, Chapel Hill, NC 27599-7264, USA. igizer@unc.edu
C L Ehlers
C Vieten
K L Seaton-Smith
H S Feiler
J V Lee
S K Segall
D A Gilder
K C Wilhelmsen
University of North Carolina at Chapel Hill · USScripps Research Institute · USCalifornia Pacific Medical Center · USUniversity of California, San Francisco · USUniversity of Illinois Urbana-Champaign · USUniversity of North Carolina Health Care · US

Funding

Supplement to Molecular and Cellular Studies on Alcohol's ActionsT32AA007573 · NIAAA · UNIV OF NORTH CAROLINA CHAPEL HILL · PI FULTON T CREWS, Thomas L. Kash · 1997 to 2026
$9.3M
RISK FACTORS FOR ALCOHOLISM IN NATIVE AMERICANSR37AA010201 · NIAAA · SCRIPPS RESEARCH INSTITUTE, THE · PI EHLERS, CINDY L · 2007 to 2015
$7.0M
RISK FACTORS FOR ALCOHOLISM IN NATIVE AMERICANSR01AA010201 · NIAAA · SCRIPPS RESEARCH INSTITUTE, THE · PI EHLERS, CINDY L · 1994 to 2006
$3.8M
NCRR NIH HHS U54 RR0250204NIAAA NIH HHS AA10201NIAAA NIH HHS R01 AA010201NIAAA NIH HHS R37 AA010201NIAAA NIH HHS T32 AA007573
6 · The paper itself

Abstract

backgroundNicotine dependence has been shown to represent a heritable condition, and several research groups have performed linkage analysis to identify genomic regions influencing this disorder though only a limited number of the findings have been replicated.

methodIn the present study, a genome-wide linkage scan for nicotine dependence was conducted in a community sample of 950 probands and 1204 relatives recruited through the University of California, San Francisco (UCSF) Family Alcoholism Study. A modified version of the Semi-Structured Assessment for the Genetics of Alcoholism (SSAGA) with additional questions that probe nicotine use was used to derive DSM-IV nicotine dependence diagnoses.

resultsA locus on chromosome 2q31.1 at 184 centiMorgans nearest to marker D2S2188 yielded a logarithm (base 10) of odds (LOD) score of 3.54 (point-wise empirical p=0.000012). Additional peaks of interest were identified on chromosomes 2q13, 4p15.33-31, 11q25 and 12p11.23-21. Follow-up analyses were conducted examining the contributions of individual nicotine dependence symptoms to the chromosome 2q31.1 linkage peak as well as examining the relationship of this chromosomal region to alcohol dependence.

conclusionsThe present report suggests that chromosome 2q31.1 confers risk to the development of nicotine dependence and that this region influences a broad range of nicotine dependence symptoms rather than a specific facet of the disorder. Further, the results show that this region is not linked to alcohol dependence in this population, and thus may influence nicotine dependence specifically.

Indexed as

Genetic LinkageAdultAlcoholismChromosomes, Human, Pair 2FemaleGenetic Predisposition to DiseaseHumansLod ScoreMaleMiddle AgedPhenotypeTobacco Use DisorderUnited States

Identifiers

PMID20594377
PMCPMC3045476
OpenAlexW2114729435

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.