Evidence map›Paper›PMID 20591865›Full record

ArticleProceedings. Biological sciences2010

Parallel adaptive evolution of Atlantic cod on both sides of the Atlantic Ocean in response to temperature.

Ian R Bradbury, Sophie Hubert, Brent Higgins, Tudor Borza, Sharen Bowman, Ian G Paterson, Paul V R Snelgrove, Corey J Morris, Robert S Gregory, David C Hardie and 4 more

Abstract read
In one paragraph

Article in Proceedings. Biological sciences, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 89 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
89citing papers in PubMed, 2 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

89 citing papers in PubMed, 2 syntheses or guidelines pooled it.

  1. Pooled it
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  13. Detecting parallel polygenic adaptation to novel evolutionary pressure in wild populations: a case study in Atlantic cod (Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2023
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  20. Supergene origin and maintenance in Atlantic cod.Nature ecology & evolution · 2022
    Article

29 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors.

Ian R BradburyMarine Gene Probe Laboratory, Department of Biology, Dalhousie University, 1355 Oxford Street, Halifax, Nova Scotia, Canada, B3H 4J1. ibradbur@me.com
Sophie Hubert
Brent Higgins
Tudor Borza
Sharen Bowman
Ian G Paterson
Paul V R Snelgrove
Corey J Morris
Robert S Gregory
David C Hardie
Jeffrey A Hutchings
Daniel E Ruzzante
Chris T Taggart
Paul Bentzen

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Despite the enormous economic and ecological importance of marine organisms, the spatial scales of adaptation and biocomplexity remain largely unknown. Yet, the preservation of local stocks that possess adaptive diversity is critical to the long-term maintenance of productive stable fisheries and ecosystems. Here, we document genomic evidence of range-wide adaptive differentiation in a broadcast spawning marine fish, Atlantic cod (Gadus morhua), using a genome survey of single nucleotide polymorphisms. Of 1641 gene-associated polymorphisms examined, 70 (4.2%) tested positive for signatures of selection using a Bayesian approach. We identify a subset of these loci (n=40) for which allele frequencies show parallel temperature-associated clines (p<0.001, r2=0.89) in the eastern and western north Atlantic. Temperature associations were robust to the statistical removal of geographic distance or latitude effects, and contrasted 'neutral' loci, which displayed no temperature association. Allele frequencies at temperature-associated loci were significantly correlated, spanned three linkage groups and several were successfully annotated supporting the involvement of multiple independent genes. Our results are consistent with the evolution and/or selective sweep of multiple genes in response to ocean temperature, and support the possibility of a new conservation paradigm for non-model marine organisms based on genomic approaches to resolving functional and adaptive diversity.

Indexed as

Adaptation, PhysiologicalAllelesAnimalsAtlantic OceanBayes TheoremConservation of Natural ResourcesExpressed Sequence TagsGadus morhuaGenetic VariationPolymorphism, Single NucleotideSelection, GeneticSequence Analysis, DNATemperature

Identifiers

PMID20591865
PMCPMC2992707

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.