Evidence map›Paper›PMID 20590242›Full record

ArticleThe Review of scientific instruments2010

Correction of the viscous drag induced errors in macromolecular manipulation experiments using atomic force microscope.

Runcong Liu, Marisa Roman, Guoliang Yang

Abstract read
In one paragraph

Article in The Review of scientific instruments, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Article
  3. Directly measuring single-molecule heterogeneity using force spectroscopy.Proceedings of the National Academy of Sciences of the United States of America · 2016
    Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Runcong LiuDepartment of Physics, Drexel University, Philadelphia, Pennsylvania 19104, USA.
Marisa Roman
Guoliang Yang

Funding

Single molecule studies of protein folding/refoldingR01GM071793 · NIGMS · DREXEL UNIVERSITY · PI YANG, GUOLIANG · 2004 to 2008
$760k
NIGMS NIH HHS R01 GM071793NIGMS NIH HHS R01-GM071793
6 · The paper itself

Abstract

We describe a method to correct the errors induced by viscous drag on the cantilever in macromolecular manipulation experiments using the atomic force microscope. The cantilever experiences a viscous drag force in these experiments because of its motion relative to the surrounding liquid. This viscous force superimposes onto the force generated by the macromolecule under study, causing ambiguity in the experimental data. To remove this artifact, we analyzed the motions of the cantilever and the liquid in macromolecular manipulation experiments, and developed a novel model to treat the viscous drag on the cantilever as the superposition of the viscous force on a static cantilever in a moving liquid and that on a bending cantilever in a static liquid. The viscous force was measured under both conditions and the results were used to correct the viscous drag induced errors from the experimental data. The method will be useful for many other cantilever based techniques, especially when high viscosity and high cantilever speed are involved.

Indexed as

ArtifactsMechanical PhenomenaSignal Processing, Computer-AssistedViscosityAlgorithmsMacromolecular SubstancesMicroscopy, Atomic ForceModels, TheoreticalMotionProtein FoldingMacromolecular Substances

Identifiers

PMID20590242
PMCPMC2896404

What OpenQuestion holds

Textmetadata
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.