Evidence map›Paper›PMID 20588307›Full record

ArticleEuropean journal of human genetics : EJHG2010

Genome-wide scan identifies a quantitative trait locus at 4p15.3 for serum urate.

Nik Cummings, Thomas D Dyer, Navaratnam Kotea, Sudhir Kowlessur, Pierrot Chitson, Paul Zimmet, John Blangero, Jeremy B M Jowett

Open access · bronzeAbstract read
In one paragraph

Article in European journal of human genetics : EJHG, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed, 1 pooled it
0.8field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 1 synthesis or guideline pooled it, 18 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Review
  4. Article
  5. Article
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 3 countries.

Nik CummingsGenomics and Systems Biology, Baker IDI Heart and Diabetes Institute, Melbourne, Victoria, Australia.
Thomas D Dyer
Navaratnam Kotea
Sudhir Kowlessur
Pierrot Chitson
Paul Zimmet
John Blangero
Jeremy B M Jowett
Baker Heart and Diabetes Institute · AUMinistry of Health and Quality of Life · MUTexas Biomedical Research Institute · USUniversity of Mauritius · MU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Elevated serum urate levels lead to gout and are associated with hypertension, metabolic syndrome, type 2 diabetes and cardiovascular diseases. The purpose of this study was to identify evidence for genetic linkage with serum urate and to determine whether variation within positional candidate genes is associated with serum urate levels in a non-European population. Genetic linkage analysis and single nucleotide polymorphism (SNP) genotyping was performed in a large family pedigree cohort from Mauritius. We assessed associations between serum urate levels and 97 SNPs in a positional candidate gene, SLC2A9. A genome-wide scan identified a new region with evidence for linkage for serum urate at 4p15.3. SNP genotyping identified significant association between six SNP variants in SLC2A9 and serum urate levels. Allelic and gender-based effects were noted for several SNPs. Significant correlations were also observed between serum urate levels and individual components of metabolic syndrome. Our study results implicate genetic variation in SLC2A9 in influencing levels of serum urate over a broad range of values in a large Mauritian family cohort.

Indexed as

AdultChromosomes, Human, Pair 4Cohort StudiesFamily HealthFemaleGene FrequencyGenetic LinkageGenome-Wide Association StudyGenotypeGlucose Transport Proteins, FacilitativeHumansMaleMauritiusMiddle AgedPedigreePolymorphism, Single NucleotideGlucose Transport Proteins, FacilitativeSLC2A9 protein, humanUric Acid

Identifiers

PMID20588307
PMCPMC2987471
OpenAlexW2020300968

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.