Evidence map›Paper›PMID 20586450›Full record

ArticleJournal of the American Chemical Society2010

Hairpin DNA-functionalized gold colloids for the imaging of mRNA in live cells.

Ashwath Jayagopal, Kristin C Halfpenny, Jonas W Perez, David W Wright

Open access · greenAbstract read
In one paragraph

Article in Journal of the American Chemical Society, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
7.3field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed, 172 citations in OpenAlex.

  1. Article
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  5. Review
  6. Facile Preparation of a Hairpin DNA-Gold Nanoparticle Monoconjugate with a Single-Dye Molecule and Lactobionic Acid as Targeting Ligand.Analytical sciences : the international journal of the Japan Society for Analytical Chemistry · 2021
    Article
  7. Protein Spherical Nucleic Acids for Live-Cell Chemical Analysis.Journal of the American Chemical Society · 2020
    Article
  8. Nucleic-Acid Structures as Intracellular Probes for Live Cells.Advanced materials (Deerfield Beach, Fla.) · 2020
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Ashwath JayagopalDepartment of Chemistry, Vanderbilt University, Nashville, Tennessee 37235, USA.
Kristin C Halfpenny
Jonas W Perez
David W Wright
Vanderbilt University · US

Funding

Shop Module CoreP30EY008126 · NEI · VANDERBILT UNIVERSITY MEDICAL CENTER · PI Kevin L Schey · 1989 to 2026
$19.6M
Chemistry-Biology Interface Training GrantT32GM065086 · NIGMS · VANDERBILT UNIVERSITY · PI BACHMANN, BRIAN O, SULIKOWSKI, GARY ALLEN · 2002 to 2022
$7.0M
Viral Detection Using Fluorescent NanocrystalsR01EB004537 · NIBIB · VANDERBILT UNIVERSITY · PI WRIGHT, DAVID W · 2006 to 2008
$997k
NEI NIH HHS P30 EY008126NEI NIH HHS P30-EY008126NIBIB NIH HHS R01 EB004537NIGMS NIH HHS T32 GM065086
6 · The paper itself

Abstract

A strategy is presented for the live cell imaging of messenger RNA using hairpin DNA-functionalized gold nanoparticles (hAuNP). hAuNP improve upon technologies for studying RNA trafficking by their efficient internalization within live cells without transfection reagents, improved resistance to DNase degradation, low cytotoxicity, and the incorporation of hairpin DNA molecular beacons to confer high specificity and sensitivity to the target mRNA sequence. Furthermore, the targeted nanoparticle-beacon construct, once bound to the target mRNA sequence, remains hybridized to the target, enabling spatial and temporal studies of RNA trafficking and downstream analysis. Targeted hAuNP exhibited high specificity for glyceraldehyde 3-phosphate dehydrogenase (GADPH) mRNA in live normal HEp-2 cells and respiratory syncytial virus (RSV) mRNA in live RSV-infected HEp-2 cells with high target to background ratios. Multiplexed fluorescence imaging of distinct mRNAs in live cells and simultaneous imaging of mRNAs with immunofluorescently stained protein targets in fixed cells was enabled by appropriate selection of molecular beacon fluorophores. Pharmacologic analysis suggested that hAuNP were internalized within cells via membrane-nanoparticle interactions. hAuNP are a promising approach for the real-time analysis of mRNA transport and processing in live cells for elucidation of biological processes and disease pathogenesis.

Indexed as

ColloidsGoldCell LineDNAFlow CytometryFluorescenceGlyceraldehyde-3-Phosphate DehydrogenasesHumansRespiratory Syncytial VirusesRNA, MessengerColloidsDNAGlyceraldehyde-3-Phosphate DehydrogenasesGoldRNA, Messenger

Identifiers

PMID20586450
PMCPMC2927968
OpenAlexW1987193293

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.