Evidence map›Paper›PMID 20585555›Full record

ArticlePLoS genetics2010

The IG-DMR and the MEG3-DMR at human chromosome 14q32.2: hierarchical interaction and distinct functional properties as imprinting control centers.

Masayo Kagami, Maureen J O'Sullivan, Andrew J Green, Yoshiyuki Watabe, Osamu Arisaka, Nobuhide Masawa, Kentarou Matsuoka, Maki Fukami, Keiko Matsubara, Fumiko Kato and 2 more

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In one paragraph

Article in PLoS genetics, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 124 papers.

0numbers the graph read from it
0cells of the map it votes in
124citing papers in PubMed
8.5field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

124 citing papers in PubMed, 207 citations in OpenAlex.

  1. Article
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  13. Imprinted Long Non-Coding RNAs in Mammalian Development and Disease.International journal of molecular sciences · 2023
    Review
  14. Article
  15. Epigenetic control and genomic imprinting dynamics of the Dlk1-Dio3 domain.Frontiers in cell and developmental biology · 2023
    Review
  16. Article
  17. Review
  18. Article
  19. Article
  20. Article

64 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 5 institutions in 3 countries.

Masayo KagamiDepartment of Endocrinology and Metabolism, National Research Institute for Child Health and Development, Tokyo, Japan.
Maureen J O'Sullivan
Andrew J Green
Yoshiyuki Watabe
Osamu Arisaka
Nobuhide Masawa
Kentarou Matsuoka
Maki Fukami
Keiko Matsubara
Fumiko Kato
Anne C Ferguson-Smith
Tsutomu Ogata
National Center For Child Health and Development · JPDokkyo University · JPOur Lady's Hospital · IETrinity College Dublin · IEUniversity of Cambridge · GB

Funding

Medical Research Council G0800784
6 · The paper itself

Abstract

Human chromosome 14q32.2 harbors the germline-derived primary DLK1-MEG3 intergenic differentially methylated region (IG-DMR) and the postfertilization-derived secondary MEG3-DMR, together with multiple imprinted genes. Although previous studies in cases with microdeletions and epimutations affecting both DMRs and paternal/maternal uniparental disomy 14-like phenotypes argue for a critical regulatory function of the two DMRs for the 14q32.2 imprinted region, the precise role of the individual DMR remains to be clarified. We studied an infant with upd(14)pat body and placental phenotypes and a heterozygous microdeletion involving the IG-DMR alone (patient 1) and a neonate with upd(14)pat body, but no placental phenotype and a heterozygous microdeletion involving the MEG3-DMR alone (patient 2). The results generated from the analysis of these two patients imply that the IG-DMR and the MEG3-DMR function as imprinting control centers in the placenta and the body, respectively, with a hierarchical interaction for the methylation pattern in the body governed by the IG-DMR. To our knowledge, this is the first study demonstrating an essential long-range imprinting regulatory function for the secondary DMR.

Indexed as

Chromosomes, Human, Pair 14DNA MethylationBase SequenceCCCTC-Binding FactorChromosome DeletionFemaleHumansInfantInfant, NewbornMolecular Sequence DataProteinsRepressor ProteinsRNA, Long NoncodingSequence AlignmentCCCTC-Binding FactorCTCF protein, humanMEG3 non-coding RNA, humanProteinsRepressor ProteinsRNA, Long Noncoding

Identifiers

PMID20585555
PMCPMC2887472
OpenAlexW2030111741

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Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.