Evidence map›Paper›PMID 20585059›Full record

ArticleJournal of bacteriology2010

Relatedness of Vibrio cholerae O1/O139 isolates from patients and their household contacts, determined by multilocus variable-number tandem-repeat analysis.

Emily A Kendall, Fahima Chowdhury, Yasmin Begum, Ashraful I Khan, Shan Li, James H Thierer, Jason Bailey, Kristen Kreisel, Carol O Tacket, Regina C LaRocque and 5 more

Abstract read
In one paragraph

Article in Journal of bacteriology, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 39 papers.

0numbers the graph read from it
0cells of the map it votes in
39citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

39 citing papers in PubMed.

  1. Article
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  9. Article
  10. Frontiers in public health · 2018
    Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Survival of Vibrio cholerae O1 on fomites.World journal of microbiology & biotechnology · 2016
    Article
  17. Article
  18. Transmission of InfectiousFrontiers in microbiology · 2016
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors.

Emily A KendallInternational Centre for Diarrhoeal Disease Research, Bangladesh, Dhaka, Bangladesh.
Fahima Chowdhury
Yasmin Begum
Ashraful I Khan
Shan Li
James H Thierer
Jason Bailey
Kristen Kreisel
Carol O Tacket
Regina C LaRocque
Jason B Harris
Edward T Ryan
Firdausi Qadri
Stephen B Calderwood
O Colin Stine

Funding

Fogarty International Clinical Research Scholars Support Center @ Vanderbilt-AAMCR24TW007988 · FIC · VANDERBILT UNIVERSITY · PI VERMUND, STEN H. · 2007 to 2011
$27.6M
Protecutive immunity to human cholera in BangladeshU01AI058935 · NIAID · MASSACHUSETTS GENERAL HOSPITAL · PI CALDERWOOD, STEPHEN B., RYAN, EDWARD T. · 2003 to 2014
$7.8M
High throughput NAPPA-proteoimmunomics and Vibrio cholerae vaccine developmentU01AI077883 · NIAID · MASSACHUSETTS GENERAL HOSPITAL · PI RYAN, EDWARD T. · 2008 to 2012
$5.6M
Training program in vaccine development and public healthD43TW005572 · FIC · MASSACHUSETTS GENERAL HOSPITAL · PI QADRI, FIRDAUSI, RYAN, EDWARD T. · 2000 to 2025
$5.4M
Identification of human gene polymorphisms related to Vibrio cholerae infectionK01TW007144 · FIC · MASSACHUSETTS GENERAL HOSPITAL · PI LAROCQUE, REGINA C · 2004 to 2009
$617k
Mucosal immune response to oral cholera vaccine Peru 15R03AI063079 · NIAID · INTERNATIONAL CTR/DIARRHOEAL DIS RES · PI QADRI, FIRDAUSI · 2005 to 2007
$158k
Food and Waterborne Diseases Integrated Research Network-26640014N01AI040014 · NIAID · University of Maryland at Baltimore · 2004 to 2004
–
FIC NIH HHS D43 TW005572FIC NIH HHS K01 TW007144FIC NIH HHS R24 TW007988NIAID NIH HHS N01 AI040014NIAID NIH HHS R03 AI063079NIAID NIH HHS U01 AI058935NIAID NIH HHS U01 AI077883
6 · The paper itself

Abstract

The genetic relatedness of Vibrio cholerae O1/O139 isolates obtained from 100 patients and 146 of their household contacts in Dhaka, Bangladesh, between 2002 and 2005 was assessed by multilocus variable-number tandem-repeat analysis. Isolate genotypes were analyzed at five loci containing tandem repeats. Across the population, as well as within households, isolates with identical genotypes were clustered in time. Isolates from individuals within the same household were more likely to have similar or identical genotypes than were isolates from different households, but even within a household, isolates from different individuals often had different genotypes. When household contacts were sampled regularly for 3 weeks after the illness of the household index patient, isolates with genotypes related to the index patient appeared in contacts, on average, approximately 3 days after the index patient, while isolates with unrelated genotypes appeared in contacts approximately 6 days after. Limited data revealed that multiple isolates from the same individual collected within days of each other or even from a single stool sample may have identical, similar, or unrelated genotypes as well. Our results demonstrate that genetically related V. cholerae strains cluster in local outbreaks but also suggest that multiple distinct strains of V. cholerae O1 may circulate simultaneously within a household.

Indexed as

Contact TracingDisease OutbreaksFamily CharacteristicsVibrio cholerae O1Vibrio cholerae O139Bacterial Typing TechniquesBangladeshCholeraDNA, BacterialGenotypeHumansMinisatellite RepeatsDNA, Bacterial

Identifiers

PMID20585059
PMCPMC2937383

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.