Evidence map›Paper›PMID 20579941›Full record

ArticleCancer cell2010

Integrative genomic profiling of human prostate cancer.

Barry S Taylor, Nikolaus Schultz, Haley Hieronymus, Anuradha Gopalan, Yonghong Xiao, Brett S Carver, Vivek K Arora, Poorvi Kaushik, Ethan Cerami, Boris Reva and 16 more

Open access · bronzeAbstract read
In one paragraph

Article in Cancer cell, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2,399 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
2,399citing papers in PubMed, 1 pooled it
148.9field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2,399 citing papers in PubMed, 1 synthesis or guideline pooled it, 3,759 citations in OpenAlex.

  1. Pooled it
  2. Trial
  3. Trial
  4. Trial
  5. Article
  6. Review
  7. Article
  8. Article
  9. Subclonal Complete Loss of CDKN1B as a Common Genomic Alteration in Prostate Cancer: Associations With Race and Prostate Cancer Outcomes.Modern pathology : an official journal of the United States and Canadian Academy of Pathology, Inc · 2026
    Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Metabolic convergence of diabetes and prostate cancer: from dysglycemia to tumor microenvironment reprogramming.Mammalian genome : official journal of the International Mammalian Genome Society · 2026
    Review
  16. Article
  17. Article
  18. Article
  19. Review
  20. Review

2,339 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

26 authors at 1 institution in 1 country.

Barry S TaylorMemorial Sloan-Kettering Cancer Center, 1275 York Avenue, New York, NY 10065, USA.
Nikolaus Schultz
Haley Hieronymus
Anuradha Gopalan
Yonghong Xiao
Brett S Carver
Vivek K Arora
Poorvi Kaushik
Ethan Cerami
Boris Reva
Yevgeniy Antipin
Nicholas Mitsiades
Thomas Landers
Igor Dolgalev
John E Major
Manda Wilson
Nicholas D Socci
Alex E Lash
Adriana Heguy
James A Eastham
Howard I Scher
Victor E Reuter
Peter T Scardino
Chris Sander
Charles L Sawyers
William L Gerald
Memorial Sloan Kettering Cancer Center · US

Funding

SPORE In Prostate CancerP50CA092629 · NCI · SLOAN-KETTERING INSTITUTE FOR CANCER RES · PI Yu Chen, MICHAEL J MORRIS · 2001 to 2026
$63.0M
Howard Hughes Medical InstituteNCI NIH HHS CA092629NCI NIH HHS P50 CA092629
6 · The paper itself

Abstract

Annotation of prostate cancer genomes provides a foundation for discoveries that can impact disease understanding and treatment. Concordant assessment of DNA copy number, mRNA expression, and focused exon resequencing in 218 prostate cancer tumors identified the nuclear receptor coactivator NCOA2 as an oncogene in approximately 11% of tumors. Additionally, the androgen-driven TMPRSS2-ERG fusion was associated with a previously unrecognized, prostate-specific deletion at chromosome 3p14 that implicates FOXP1, RYBP, and SHQ1 as potential cooperative tumor suppressors. DNA copy-number data from primary tumors revealed that copy-number alterations robustly define clusters of low- and high-risk disease beyond that achieved by Gleason score. The genomic and clinical outcome data from these patients are now made available as a public resource.

Indexed as

Gene Expression ProfilingGenome, HumanAdultAgedAged, 80 and overAnimalsBiomarkers, TumorChromosomes, Human, Pair 3Comparative Genomic HybridizationGene DosageHumansMaleMiceMiddle AgedNeoplasm MetastasisOligonucleotide Array Sequence AnalysisBiomarkers, TumorOncogene Proteins, FusionTMPRSS2-ERG fusion protein, human

Identifiers

PMID20579941
PMCPMC3198787
OpenAlexW2107633226

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.