Evidence map›Paper›PMID 20578699›Full record

ArticleJournal of medicinal chemistry2010

Complexes of bacterial nicotinate mononucleotide adenylyltransferase with inhibitors: implication for structure-based drug design and improvement.

Nian Huang, Rohit Kolhatkar, Yvonne Eyobo, Leonardo Sorci, Irina Rodionova, Andrei L Osterman, Alexander D Mackerell, Hong Zhang

Open access · greenAbstract read
In one paragraph

Article in Journal of medicinal chemistry, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
0.9field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 27 citations in OpenAlex.

  1. Article
  2. Inhibitors of NADInternational journal of molecular sciences · 2024
    Review
  3. Article
  4. First series ofBeilstein journal of organic chemistry · 2022
    Article
  5. Article
  6. Review
  7. Article
  8. Network-Based Metabolism-Centered Screening of Potential Drug Targets inFrontiers in cellular and infection microbiology · 2019
    Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Review
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

Nian HuangDepartment of Biochemistry, University of Texas Southwestern Medical Center, 5323 Harry Hines Boulevard, Dallas, Texas 75390, USA.
Rohit Kolhatkar
Yvonne Eyobo
Leonardo Sorci
Irina Rodionova
Andrei L Osterman
Alexander D Mackerell
Hong Zhang
Institute for Medical Research · USThe University of Texas Southwestern Medical Center · USUniversity of Maryland, Baltimore · US

Funding

Targeting cofactor biosynthesis in biodefense pathogensR01AI059146 · NIAID · SANFORD BURNHAM PREBYS MEDICAL DISCOVERY INSTITUTE · PI OSTERMAN, ANDREI L · 2005 to 2009
$1.9M
NIAID NIH HHS AI059146NIAID NIH HHS R01 AI059146
6 · The paper itself

Abstract

Bacterial nicotinate mononucleotide adenylyltransferase encoded by the essential gene nadD plays a central role in the synthesis of the redox cofactor NAD(+). The NadD enzyme is conserved in the majority of bacterial species and has been recognized as a novel target for developing new and potentially broad-spectrum antibacterial therapeutics. Here we report the crystal structures of Bacillus anthracis NadD in complex with three NadD inhibitors, including two analogues synthesized in the present study. These structures revealed a common binding site shared by different classes of NadD inhibitors and explored the chemical environment surrounding this site. The structural data obtained here also showed that the subtle changes in ligand structure can lead to significant changes in the binding mode, information that will be useful for future structure-based optimization and design of high affinity inhibitors.

Indexed as

Bacillus anthracisBacterial ProteinsBinding SitesCrystallography, X-RayEnzyme InhibitorsHydrazinesHydrazonesModels, MolecularNaphthalenesNicotinamide-Nucleotide AdenylyltransferasePropionatesBacterial ProteinsEnzyme InhibitorsHydrazinesHydrazonesNaphthalenesNicotinamide-Nucleotide Adenylyltransferasenicotinic acid mononucleotide adenylyltransferasePropionates

Identifiers

PMID20578699
PMCPMC2915899
OpenAlexW1982178871

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.