Evidence map›Paper›PMID 20577777›Full record

ArticleCellular and molecular life sciences : CMLS2010

Pax6 localizes to chromatin-rich territories and displays a slow nuclear mobility altered by disease mutations.

Julianne Elvenes, Eva Sjøttem, Turid Holm, Geir Bjørkøy, Terje Johansen

Open access · greenAbstract read
In one paragraph

Article in Cellular and molecular life sciences : CMLS, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.9field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 9 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Julianne ElvenesMolecular Cancer Research Group, Institute of Medical Biology, University of Tromsø, 9037 Tromso, Norway.
Eva Sjøttem
Turid Holm
Geir Bjørkøy
Terje Johansen
UiT The Arctic University of Norway · NO

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The transcription factor Pax6 is crucial for the embryogenesis of multiple organs, including the eyes, parts of the brain and the pancreas. Mutations in one allele of PAX6 lead to eye diseases including Peter's anomaly and aniridia. Here, we use fluorescence recovery after photobleaching to show that Pax6 and also other Pax family proteins display a strikingly low nuclear mobility compared to other transcriptional regulators. For Pax6, the slow mobility is largely due to the presence of two DNA-binding domains, but protein-protein interactions also contribute. Consistently, the subnuclear localization of Pax6 suggests that it interacts preferentially with chromatin-rich territories. Some aniridia-causing missense mutations in Pax6 have impaired DNA-binding affinity. Interestingly, when these mutants were analyzed by FRAP, they displayed a pronounced increased mobility compared to wild-type Pax6. Hence, our results support the conclusion that disease mutations result in proteins with impaired function because of altered DNA- and protein-interaction capabilities.

Indexed as

Mutation, MissenseAnimalsCell NucleusChromatinEye AbnormalitiesEye ProteinsFluorescence Recovery After PhotobleachingGenes, ReporterHeLa CellsHomeodomain ProteinsHumansMicePaired Box Transcription FactorsPAX6 Transcription FactorRecombinant Fusion ProteinsRepressor ProteinsChromatinEye ProteinsHomeodomain ProteinsPaired Box Transcription FactorsPAX6 protein, humanPax6 protein, mousePAX6 Transcription FactorRecombinant Fusion ProteinsRepressor Proteins

Identifiers

PMID20577777
PMCPMC11115490
OpenAlexW1965164979

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.