Evidence map›Paper›PMID 20575574›Full record

ArticleNano letters2010

Immobilization and one-dimensional arrangement of virus capsids with nanoscale precision using DNA origami.

Nicholas Stephanopoulos, Minghui Liu, Gary J Tong, Zhe Li, Yan Liu, Hao Yan, Matthew B Francis

Open access · greenAbstract read
In one paragraph

Article in Nano letters, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
7.3field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed, 130 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. ACS nano · 2021
    Article
  7. Hybrid Nanoassemblies from Viruses and DNA Nanostructures.Nanomaterials (Basel, Switzerland) · 2021
    Review
  8. Photocontrolled Dopamine Polymerization on DNA Origami with Nanometer Resolution.Angewandte Chemie (International ed. in English) · 2020
    Article
  9. Article
  10. Article
  11. Precision engineering of targeted nanocarriers.Wiley interdisciplinary reviews. Nanomedicine and nanobiotechnology · 2018
    Review
  12. Review
  13. Patterning protein complexes on DNA nanostructures using a GFP nanobody.Protein science : a publication of the Protein Society · 2016
    Article
  14. Review
  15. Review
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Nicholas StephanopoulosDepartment of Chemistry, University of California, Berkeley, CA, USA.
Minghui Liu
Gary J Tong
Zhe Li
Yan Liu
Hao Yan
Matthew B Francis
Arizona State University · USLawrence Berkeley National Laboratory · USUniversity of California, Berkeley · US

Funding

Water Soluble Nanoarrays for Single Cell ProteomicsR01GM088818 · NIGMS · ARIZONA STATE UNIVERSITY-TEMPE CAMPUS · PI YAN, HAO · 2009 to 2013
$1.5M
NIGMS NIH HHS R01 GM088818
6 · The paper itself

Abstract

DNA origami was used as a scaffold to arrange spherical virus capsids into one-dimensional arrays with precise nanoscale positioning. To do this, we first modified the interior surface of bacteriophage MS2 capsids with fluorescent dyes as a model cargo. An unnatural amino acid on the external surface was then coupled to DNA strands that were complementary to those extending from origami tiles. Two different geometries of DNA tiles (rectangular and triangular) were used. The capsids associated with tiles of both geometries with virtually 100% efficiency under mild annealing conditions, and the location of capsid immobilization on the tile could be controlled by the position of the probe strands. The rectangular tiles and capsids could then be arranged into one-dimensional arrays by adding DNA strands linking the corners of the tiles. The resulting structures consisted of multiple capsids with even spacing (approximately 100 nm). We also used a second set of tiles that had probe strands at both ends, resulting in a one-dimensional array of alternating capsids and tiles. This hierarchical self-assembly allows us to position the virus particles with unprecedented control and allows the future construction of integrated multicomponent systems from biological scaffolds using the power of rationally engineered DNA nanostructures.

Indexed as

CapsidDNA, Single-StrandedLevivirusMicroscopy, Atomic ForceNanostructuresNanotechnologyNucleic Acid ConformationDNA, Single-Stranded

Identifiers

PMID20575574
PMCPMC3083853
OpenAlexW1992552842

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.