Evidence map›Paper›PMID 20574656›Full record

ArticleHuman genetics2010

Association between colony-stimulating factor 1 receptor gene polymorphisms and asthma risk.

Eun Kyong Shin, Shin-Hwa Lee, Sung-Hwan Cho, Seok Jung, Sang Hyuk Yoon, Sung Woo Park, Jong Sook Park, Soo Taek Uh, Yang Ki Kim, Yong Hoon Kim and 4 more

Open access · hybridAbstract read
In one paragraph

Article in Human genetics, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
0.9field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 22 citations in OpenAlex.

  1. Article
  2. Review
  3. Complement C1q essential for aeroallergen sensitization via CSF1RThe Journal of allergy and clinical immunology · 2023
    Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Immunoregulatory properties of the cytokine IL-34.Cellular and molecular life sciences : CMLS · 2017
    Review
  10. A Csf1r-EGFP Transgene Provides a Novel Marker for Monocyte Subsets in Sheep.Journal of immunology (Baltimore, Md. : 1950) · 2016
    Article
  11. The search for genetic variants and epigenetics related to asthma.Allergy, asthma & immunology research · 2011
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 4 institutions in 1 country.

Eun Kyong ShinDepartment of Internal Medicine, Genome Research Center for Allergy and Respiratory Diseases, Soonchunhyang University Bucheon Hospital, Jung Dong, Wonmi Ku, Gyeonggi Do, Korea.
Shin-Hwa Lee
Sung-Hwan Cho
Seok Jung
Sang Hyuk Yoon
Sung Woo Park
Jong Sook Park
Soo Taek Uh
Yang Ki Kim
Yong Hoon Kim
Jae-Sung Choi
Byung-Lae Park
Hyoung Doo Shin
Choon-Sik Park
Soonchunhyang University · KRBucheon University · KRSNP Genetics (South Korea) · KRSoonchunhyang University Hospital · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Colony-stimulating factor 1 receptor (CSF1R) is expressed in monocytes/macrophages and dendritic cells. These cells play important roles in the innate immune response, which is regarded as an important aspect of asthma development. Genetic alterations in the CSF1R gene may contribute to the development of asthma. We investigated whether CSF1R gene polymorphisms were associated with the risk of asthma. Through direct DNA sequencing of the CSF1R gene, we identified 28 single nucleotide polymorphisms (SNPs) and genotyped them in 303 normal controls and 498 asthmatic patients. Expression of CSF1R protein and mRNA were measured on CD14-positive monocytes and neutrophils in peripheral blood of asthmatic patients using flow cytometry and real-time PCR. Among the 28 polymorphisms, two intronic polymorphism (+20511C>T and +22693T>C) were associated with the risk of asthma by logistic regression analysis. The frequencies of the minor allele at CSF1R +20511C>T and +22693T>C were higher in asthmatic subjects than in normal controls (4.6 vs. 7.7%, p = 0.001 in co-dominant and dominant models; 16.4 vs. 25.8%, p = 0.0006 in a recessive model). CSF1R mRNA levels in neutrophils of the asthmatic patients having the +22693CC allele were higher than in those having the +22693TT allele (p = 0.026). Asthmatic patients with the +22693CC allele also showed significantly higher CSF1R expression on CD14-positive monocytes and neutrophils than did those with the +22693TT allele (p = 0.045 and p = 0.044). The +20511C>T SNP had no association with CSF1R mRNA or protein expression. In conclusion, the minor allele at CSF1R +22693T>C may have a susceptibility effect in the development of asthma, via increased CSF1R protein and mRNA expression in inflammatory cells.

Indexed as

Polymorphism, Single NucleotideAllelesAsthmaBase SequenceCase-Control StudiesDNA PrimersGene FrequencyGenetic Predisposition to DiseaseHumansImmunity, InnateLinkage DisequilibriumModels, GeneticMonocytesNeutrophilsReceptor, Macrophage Colony-Stimulating FactorRNA, MessengerDNA PrimersReceptor, Macrophage Colony-Stimulating FactorRNA, Messenger

Identifiers

PMID20574656
PMCPMC2921506
OpenAlexW2094893870

What OpenQuestion holds

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LicenceCC BY-NC
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.