Evidence map›Paper›PMID 20573195›Full record

ArticleJournal of negative results in biomedicine2010

The Drosophila Anion Exchanger (DAE) lacks a detectable interaction with the spectrin cytoskeleton.

Ronald R Dubreuil, Amlan Das, Christine Base, G Harper Mazock

Open access · hybridAbstract read
In one paragraph

Article in Journal of negative results in biomedicine, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.7field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 11 citations in OpenAlex.

  1. Article
  2. Review
  3. NaThe Journal of physiology · 2017
    Article
  4. Article
  5. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Ronald R DubreuilDept. of Biological Sciences, University of Illinois at Chicago, 900 S. Ashland Ave, Chicago, IL 60607, USA. ron@uic.edu
Amlan Das
Christine Base
G Harper Mazock
University of Illinois Chicago · USUniversity of Pennsylvania · US

Funding

GENETIC STUDIES OF THE MEMBRANE SKELETONR01GM049301 · NIGMS · UNIVERSITY OF ILLINOIS AT CHICAGO · PI DUBREUIL, RONALD R · 1995 to 2004
$1.1M
NIGMS NIH HHS GM49301
6 · The paper itself

Abstract

backgroundCurrent models suggest that the spectrin cytoskeleton stabilizes interacting ion transport proteins at the plasma membrane. The human erythrocyte anion exchanger (AE1) was the first membrane transport protein found to be associated with the spectrin cytoskeleton. Here we evaluated a conserved anion exchanger from Drosophila (DAE) as a marker for studies of the downstream effects of spectrin cytoskeleton mutations.

resultsSequence comparisons established that DAE belongs to the SLC4A1-3 subfamily of anion exchangers that includes human AE1. Striking sequence conservation was observed in the C-terminal membrane transport domain and parts of the N-terminal cytoplasmic domain, but not in the proposed ankyrin-binding site. Using an antibody raised against DAE and a recombinant transgene expressed in Drosophila S2 cells DAE was shown to be a 136 kd plasma membrane protein. A major site of expression was found in the stomach acid-secreting region of the larval midgut. DAE codistributed with an infolded subcompartment of the basal plasma membrane of interstitial cells. However, spectrin did not codistribute with DAE at this site or in anterior midgut cells that abundantly expressed both spectrin and DAE. Ubiquitous knockdown of DAE with dsRNA eliminated antibody staining and was lethal, indicating that DAE is an essential gene product in Drosophila.

conclusionsBased on the lack of colocalization and the lack of sequence conservation at the ankyrin-binding site, it appears that the well-characterized interaction between AE1 and the spectrin cytoskeleton in erythrocytes is not conserved in Drosophila. The results establish a pattern in which most of the known interactions between the spectrin cytoskeleton and the plasma membrane in mammals do not appear to be conserved in Drosophila.

Indexed as

Amino Acid SequenceAnimalsAnion Exchange Protein 1, ErythrocyteAntibodiesAntiportersCytoskeletonDigestive SystemDrosophila melanogasterDrosophila ProteinsGene Knockdown TechniquesHumansLarvaMolecular Sequence DataProtein BindingProtein TransportRNA InterferenceAnion Exchange Protein 1, ErythrocyteAntibodiesAntiportersDrosophila ProteinsSpectrin

Identifiers

PMID20573195
PMCPMC2901199
OpenAlexW2138684449

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.