Evidence map›Paper›PMID 20571824›Full record

ArticlePlanta2010

Expression analysis of the auxin efflux carrier family in tomato fruit development.

Sogo Nishio, Ryo Moriguchi, Hiroki Ikeda, Hideki Takahashi, Hideyuki Takahashi, Nobuharu Fujii, Thomas J Guilfoyle, Koki Kanahama, Yoshinori Kanayama

Abstract read
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In one paragraph

Article in Planta, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
5.4field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 51 citations in OpenAlex.

  1. Review
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  5. Article
  6. Characterization and Expression Analysis of the CaPlants (Basel, Switzerland) · 2019
    Article
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  10. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 2 countries.

Sogo NishioGraduate School of Agricultural Science, Tohoku University, Sendai 981-8555, Japan.
Ryo Moriguchi
Hiroki Ikeda
Hideki Takahashi
Hideyuki Takahashi
Nobuharu Fujii
Thomas J Guilfoyle
Koki Kanahama
Yoshinori Kanayama
Tohoku University · JPUniversity of Missouri · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Auxin transport network, which is important in the integration of plant developmental signals, depends on differential expression of the auxin efflux carrier PIN gene family. We cloned three tomato PIN (referred as SlPIN) cDNAs and examined their expression patterns in fruit and other organs. The expression of SlPIN1 and SlPIN2 was highest in very young fruit immediately after anthesis, whereas the expression of SlPIN3 was low at this same stage of fruit development. SlPIN2::GUS was expressed in ovules at anthesis and in young developing seeds at 4 days after anthesis, while SlPIN1::GUS was expressed in whole fruit. The DR5::GUS auxin-responsive reporter gene was expressed in the fruit and peduncle at anthesis and was higher in the peduncle 4 days after anthesis. These studies suggest that auxin is likely transported from young seeds by SlPIN1 and SlPIN2 and accumulated in peduncles where SlPIN gene expression is low in tomato. The possible role of SlPINs in fruit set was discussed.

Indexed as

Amino Acid SequenceBase SequenceCarrier ProteinsCloning, MolecularDNA, ComplementaryDNA PrimersGenes, PlantGenes, ReporterIndoleacetic AcidsMolecular Sequence DataPolymerase Chain ReactionPromoter Regions, GeneticSequence Homology, Amino AcidSolanum lycopersicumCarrier ProteinsDNA, ComplementaryDNA PrimersIndoleacetic Acids

Identifiers

PMID20571824
OpenAlexW2051363331

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.