Evidence map›Paper›PMID 20571081›Full record

ArticleNucleic acids research2010

BRG1 co-localizes with DNA replication factors and is required for efficient replication fork progression.

Stephanie M Cohen, Paul D Chastain, Gary B Rosson, Beezly S Groh, Bernard E Weissman, David G Kaufman, Scott J Bultman

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 38 papers.

0numbers the graph read from it
0cells of the map it votes in
38citing papers in PubMed
2.3field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

38 citing papers in PubMed, 58 citations in OpenAlex.

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  12. NAR cancer · 2020
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  13. Cancers · 2020
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Stephanie M CohenDepartment of Pathology and Laboratory Medicine, University of North Carolina, Chapel Hill, NC 27599, USA.
Paul D Chastain
Gary B Rosson
Beezly S Groh
Bernard E Weissman
David G Kaufman
Scott J Bultman
University of North Carolina at Chapel Hill · US

Funding

UNC-CH CENTER FOR ENVIRONMENTAL HEALTH &SUSCEPTIBILITYP30ES010126 · NIEHS · UNIV OF NORTH CAROLINA CHAPEL HILL · PI Melissa A. Troester · 2001 to 2026
$36.3M
CANCER SUSCEPTIBILITY AND S PHASE INITIATION SITESR01CA084493 · NCI · UNIV OF NORTH CAROLINA CHAPEL HILL · PI KAUFMAN, DAVID G. · 2000 to 2009
$2.5M
Dietary Fiber, Gut Microflora, & Epigenetic Events that Prevent Colorectal CancerR01CA125237 · NCI · UNIV OF NORTH CAROLINA CHAPEL HILL · PI BULTMAN, SCOTT J · 2007 to 2011
$1.4M
SWI/SNF complex loss facilitates gene silencing during NSCLC developmentR01CA138841 · NCI · UNIV OF NORTH CAROLINA CHAPEL HILL · PI WEISSMAN, BERNARD E. · 2009 to 2010
$614k
NCI NIH HHS CA084493NCI NIH HHS CA125237NCI NIH HHS CA138841NCI NIH HHS R01 CA084493NCI NIH HHS R01 CA125237NCI NIH HHS R01 CA138841NIEHS NIH HHS P30 ES010126
6 · The paper itself

Abstract

For DNA replication to occur, chromatin must be remodeled. Yet, we know very little about which proteins alter nucleosome occupancy at origins and replication forks and for what aspects of replication they are required. Here, we demonstrate that the BRG1 catalytic subunit of mammalian SWI/SNF-related complexes co-localizes with origin recognition complexes, GINS complexes, and proliferating cell nuclear antigen at sites of DNA replication on extended chromatin fibers. The specific pattern of BRG1 occupancy suggests it does not participate in origin selection but is involved in the firing of origins and the process of replication elongation. This latter function is confirmed by the fact that Brg1 mutant mouse embryos and RNAi knockdown cells exhibit a 50% reduction in replication fork progression rates, which is associated with decreased cell proliferation. This novel function of BRG1 is consistent with its requirement during embryogenesis and its role as a tumor suppressor to maintain genome stability and prevent cancer.

Indexed as

DNA ReplicationAnimalsCell ProliferationChromatinDNA-Binding ProteinsDNA HelicasesEmbryonic DevelopmentErythroid CellsHeLa CellsHumansMiceMutationNuclear ProteinsPhenotypeTranscription FactorsChromatinDNA-Binding ProteinsDNA HelicasesNuclear ProteinsSmarca4 protein, mouseTranscription Factors

Identifiers

PMID20571081
PMCPMC2978342
OpenAlexW2046702833

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.